Genealogical Estimation of Variant Age (GEVA)
Inference of the ancestral origin of a genetic variant at a single locus
Unmatched Variant ID, using internal ID instead:
X436545184
Alleles:
reference
A–
alternate
G–
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
Chromosome
2
position 136,545,184
(GRCh37)
Allele frequency in SGDP ⇪
Sample | 93.5% |
6.5% |
|
AFR |
93.2% |
6.8% |
|
AMR |
100.0% |
0.0% |
|
CAS |
100.0% |
0.0% |
|
EAS |
100.0% |
0.0% |
|
OCN |
90.0% |
10.0% |
|
SAS |
93.4% |
6.6% |
|
WEA |
86.7% |
13.3% |
|
reference | ← allele frequency → | alternate |
Select clock model
Age estimation summary
Data source | Estimated age of G allele |
# pairs = concordant + discordant | Quality score |
---|---|---|---|
Genomes in SGDP | 2,611.3 generations | 196 = 96 + 100 | 0.740 |
Pairwise results table
Haplotype pair | Pair type | Data source | Breakpoint positions | Physical length (bp) | Genetic Length (cM) | α | β | Mean TMRCA (generations) |
---|---|---|---|---|---|---|---|---|
S_Masai-2A + S_Yadava-1A | Concordant | SGDP | 136,391,342 – 136,762,052 |
370,710.0 |
0.05242810 |
27 | 220.8833 | 2,444.7 |
S_Luo-2B + S_Russian-2A | Concordant | SGDP | 136,413,133 – 136,762,052 |
348,918.5 |
0.04988177 |
25 | 208.3863 | 2,399.4 |
S_Finnish-2B + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,976,448 |
1,216,350.0 |
0.32693006 |
69 | 846.3920 | 1,630.5 |
S_Palestinian-3B + S_Jordanian-1B | Concordant | SGDP | 135,729,071 – 136,762,052 |
1,032,981.0 |
0.22034905 |
46 | 673.1101 | 1,366.8 |
S_Sindhi-1B + S_Tajik-1B | Concordant | SGDP | 135,340,792 – 136,555,141 |
1,214,349.0 |
0.35426347 |
35 | 867.2983 | 807.1 |
S_Masai-1A + B_Australian-3A | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
43 | 575.9127 | 1,493.3 |
S_Iraqi_Jew-2B + S_Tajik-1A | Concordant | SGDP | 135,597,516 – 136,781,557 |
1,184,041.5 |
0.25673194 |
34 | 774.7255 | 877.7 |
B_Australian-3B + S_Iraqi_Jew-2B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
57 | 562.7585 | 2,025.7 |
B_Australian-3B + S_Jordanian-1A | Concordant | SGDP | 135,518,997 – 136,774,712 |
1,255,715.0 |
0.34209442 |
59 | 877.4187 | 1,344.9 |
B_Australian-3B + S_Greek-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
56 | 562.7585 | 1,990.2 |
B_Australian-3B + S_Hungarian-1A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
42 | 562.7585 | 1,492.6 |
B_Australian-3B + S_Finnish-2B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
52 | 562.7585 | 1,848.0 |
B_Australian-3A + S_Tajik-1B | Concordant | SGDP | 135,760,098 – 136,555,141 |
795,043.5 |
0.06249769 |
23 | 432.6190 | 1,063.3 |
B_Australian-3A + S_Jordanian-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
38 | 575.9127 | 1,319.6 |
S_Masai-2A + S_Greek-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
74 | 552.7512 | 2,677.5 |
B_Australian-3B + S_Tajik-1A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
54 | 562.7585 | 1,919.1 |
S_Greek-1A + S_Palestinian-3A | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
23 | 488.3165 | 942.0 |
S_Bougainville-1A + S_Hawaiian-1A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
18 | 493.9515 | 728.8 |
S_Masai-1A + S_Hungarian-1A | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
43 | 575.9127 | 1,493.3 |
S_Bougainville-1A + S_Yadava-1B | Concordant | SGDP | 135,978,431 – 137,040,044 |
1,061,613.0 |
0.43706226 |
26 | 860.2240 | 604.5 |
S_Masai-1B + S_Greek-1A | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
49 | 488.3165 | 2,006.9 |
S_Bougainville-1A + S_Greek-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
42 | 575.9127 | 1,458.6 |
S_Russian-2A + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
21 | 159.9075 | 2,626.5 |
S_Bougainville-1A + S_Iraqi_Jew-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
29 | 552.7512 | 1,049.3 |
S_Luo-2B + S_Sindhi-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
20 | 224.3422 | 1,783.0 |
S_Bougainville-1A + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,778,638 |
1,018,540.0 |
0.09632993 |
42 | 566.9631 | 1,481.6 |
S_Luo-2B + S_Tajik-1A | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
31 | 211.3147 | 2,934.0 |
S_Hawaiian-1A + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,649,985 |
260,508.5 |
0.04937304 |
13 | 165.5425 | 1,570.6 |
S_Masai-2A + S_Bougainville-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
48 | 552.7512 | 1,736.8 |
S_Hawaiian-1A + S_Finnish-2A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
40 | 493.9515 | 1,619.6 |
S_Masai-2A + S_Sindhi-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
65 | 552.7512 | 2,351.9 |
S_Hawaiian-1A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
43 | 493.9515 | 1,741.1 |
S_Masai-2A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
23 | 156.7428 | 2,934.7 |
S_Hawaiian-1A + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
37 | 493.9515 | 1,498.1 |
S_Masai-2B + S_Hungarian-1B | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
54 | 488.3165 | 2,211.7 |
S_Hawaiian-1A + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
43 | 493.9515 | 1,741.1 |
S_Masai-1A + S_Balochi-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
45 | 493.9515 | 1,822.0 |
S_Hawaiian-1A + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
13 | 159.9075 | 1,625.9 |
S_Masai-1A + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
60 | 653.5649 | 1,836.1 |
S_Hawaiian-1A + S_Chechen-1A | Concordant | SGDP | 136,500,227 – 136,649,985 |
149,758.0 |
0.02611318 |
10 | 93.7744 | 2,132.8 |
S_Masai-1B + S_Bougainville-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
49 | 552.7512 | 1,772.9 |
S_Hawaiian-1B + S_Finnish-2A | Concordant | SGDP | 135,597,516 – 136,774,712 |
1,177,196.0 |
0.25197117 |
62 | 767.6310 | 1,615.4 |
S_Masai-1B + S_Abkhasian-2A | Concordant | SGDP | 136,391,342 – 136,642,220 |
250,878.5 |
0.04378360 |
19 | 156.4486 | 2,428.9 |
S_Hawaiian-1B + S_Iraqi_Jew-2B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
59 | 562.7585 | 2,096.8 |
S_Jordanian-1A + S_Tajik-1B | Concordant | SGDP | 135,760,098 – 136,555,141 |
795,043.5 |
0.06249769 |
36 | 432.6190 | 1,664.3 |
S_Hawaiian-1B + S_Abkhasian-2B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
40 | 562.7585 | 1,421.6 |
S_Abkhasian-2B + S_Chechen-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
47 | 552.7512 | 1,700.6 |
S_Hawaiian-1B + S_Tajik-1A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
52 | 562.7585 | 1,848.0 |
S_Luo-2B + S_Yadava-1A | Concordant | SGDP | 135,930,669 – 136,762,052 |
831,383.0 |
0.07504234 |
84 | 460.0977 | 3,651.4 |
S_Hawaiian-1B + S_Tajik-1B | Concordant | SGDP | 135,760,098 – 136,555,141 |
795,043.5 |
0.06249769 |
30 | 432.6190 | 1,386.9 |
S_Luo-2B + S_Jordanian-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
21 | 224.3422 | 1,872.1 |
S_Yadava-1A + S_Balochi-1B | Concordant | SGDP | 136,389,477 – 136,649,985 |
260,508.5 |
0.04937304 |
14 | 165.5425 | 1,691.4 |
S_Luo-2B + S_Chechen-1B | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
26 | 211.3147 | 2,460.8 |
S_Yadava-1A + S_Sindhi-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
17 | 224.3422 | 1,515.5 |
S_Finnish-2A + S_Tajik-1A | Concordant | SGDP | 135,760,098 – 136,778,638 |
1,018,540.0 |
0.09632993 |
23 | 566.9631 | 811.3 |
S_Yadava-1A + S_Greek-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
22 | 224.3422 | 1,961.3 |
S_Finnish-2B + S_Chechen-1B | Concordant | SGDP | 135,760,098 – 137,040,522 |
1,280,424.0 |
0.45832383 |
23 | 982.2626 | 468.3 |
S_Yadava-1A + S_Hungarian-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
18 | 224.3422 | 1,604.7 |
S_Masai-2A + S_Hawaiian-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
63 | 552.7512 | 2,279.5 |
S_Yadava-1B + S_Sindhi-1B | Concordant | SGDP | 135,978,431 – 136,762,052 |
783,620.5 |
0.07237876 |
31 | 435.0408 | 1,425.2 |
S_Masai-2A + S_Yadava-1B | Concordant | SGDP | 136,411,978 – 136,762,052 |
350,074.0 |
0.04991606 |
26 | 208.9684 | 2,488.4 |
S_Yadava-1B + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
15 | 159.9075 | 1,876.1 |
S_Masai-2A + S_Finnish-2B | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
30 | 211.3147 | 2,839.4 |
S_Balochi-1B + S_Sindhi-1B | Concordant | SGDP | 135,340,792 – 136,649,985 |
1,309,193.0 |
0.37402263 |
32 | 928.6307 | 689.2 |
S_Masai-2A + S_Hungarian-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
58 | 552.7512 | 2,098.6 |
S_Balochi-1B + S_Finnish-2B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
52 | 493.9515 | 2,105.5 |
S_Masai-2A + S_Tajik-1B | Concordant | SGDP | 135,760,098 – 136,555,141 |
795,043.5 |
0.06249769 |
41 | 432.6190 | 1,895.4 |
S_Balochi-1B + S_Jordanian-1A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
49 | 493.9515 | 1,984.0 |
S_Masai-2B + B_Australian-3B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
64 | 552.7512 | 2,315.7 |
S_Balochi-1B + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
13 | 159.9075 | 1,625.9 |
S_Hungarian-1A + S_Abkhasian-2B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
32 | 575.9127 | 1,111.3 |
S_Luo-2A + B_Australian-3A | Concordant | SGDP | 135,909,353 – 136,785,841 |
876,487.5 |
0.09089119 |
28 | 494.4269 | 1,132.6 |
S_Masai-1A + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
15 | 224.3422 | 1,337.2 |
S_Luo-2A + S_Hawaiian-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
47 | 562.7585 | 1,670.3 |
S_Masai-1A + S_Finnish-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
57 | 653.5649 | 1,744.3 |
S_Luo-2A + S_Greek-1A | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
32 | 488.3165 | 1,310.6 |
S_Masai-1A + S_Hungarian-1B | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
37 | 488.3165 | 1,515.4 |
S_Luo-2A + S_Iraqi_Jew-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
43 | 653.5649 | 1,315.9 |
S_Iraqi_Jew-2B + S_Chechen-1B | Concordant | SGDP | 135,487,023 – 136,976,448 |
1,489,424.5 |
0.57893785 |
36 | 1,179.0740 | 610.6 |
S_Luo-2A + S_Jordanian-1A | Concordant | SGDP | 135,993,765 – 136,785,841 |
792,075.5 |
0.08668203 |
31 | 450.5419 | 1,376.1 |
S_Iraqi_Jew-1B + S_Jordanian-1B | Concordant | SGDP | 135,677,724 – 136,762,052 |
1,084,327.5 |
0.23803548 |
43 | 711.9056 | 1,208.0 |
S_Luo-2A + S_Abkhasian-2B | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
45 | 653.5649 | 1,377.1 |
S_Masai-1B + S_Masai-2A | Concordant | SGDP | 135,480,647 – 137,040,044 |
1,559,397.0 |
0.70704532 |
17 | 1,315.1468 | 258.5 |
S_Luo-2A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
15 | 156.7428 | 1,914.0 |
S_Masai-1B + S_Jordanian-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
69 | 552.7512 | 2,496.6 |
S_Sindhi-1A + S_Iraqi_Jew-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
44 | 653.5649 | 1,346.5 |
S_Masai-1B + S_Chechen-1B | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
27 | 211.3147 | 2,555.4 |
S_Sindhi-1A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,340,792 – 137,040,044 |
1,699,252.0 |
0.74496587 |
80 | 1,412.6137 | 1,132.7 |
S_Palestinian-3B + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,778,638 |
1,018,540.0 |
0.09632993 |
61 | 566.9631 | 2,151.8 |
S_Sindhi-1A + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
63 | 653.5649 | 1,927.9 |
S_Jordanian-1B + S_Abkhasian-2A | Concordant | SGDP | 136,290,439 – 136,642,220 |
351,781.5 |
0.05552210 |
15 | 214.2728 | 1,400.1 |
S_Sindhi-1A + S_Tajik-1B | Concordant | SGDP | 135,340,792 – 136,555,141 |
1,214,349.0 |
0.35426347 |
45 | 867.2983 | 1,037.7 |
S_Russian-2A + S_Tajik-1A | Concordant | SGDP | 135,760,098 – 136,778,638 |
1,018,540.0 |
0.09632993 |
27 | 566.9631 | 952.4 |
S_Chechen-1A + S_Tajik-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
11 | 156.7428 | 1,403.6 |
B_Australian-3A + B_Australian-3B | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
44 | 653.5649 | 1,346.5 |
B_Australian-3A + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
47 | 575.9127 | 1,632.2 |
S_Jordanian-1B + S_Mandenka-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
64 | 552.7512 | 2,315.7 |
S_Jordanian-1B + S_Tlingit-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Palestinian-3B + S_Lezgin-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
46 | 552.7512 | 1,664.4 |
S_Tajik-1B + S_Tu-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1A + S_Even-1B | Discordant | SGDP | 135,760,098 – 136,545,185 |
785,087.5 |
0.06065903 |
61 | 426.3692 | 2,861.4 |
S_Abkhasian-2B + B_Australian-4A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Iraqi_Jew-1A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
59 | 562.7585 | 2,096.8 |
B_Australian-3B + S_Korean-1A | Discordant | SGDP | 135,760,098 – 136,776,467 |
1,016,369.5 |
0.09473490 |
58 | 564.6453 | 2,054.4 |
B_Australian-3B + S_Hezhen-1A | Discordant | SGDP | 135,342,106 – 136,776,467 |
1,434,361.5 |
0.38345101 |
81 | 996.2543 | 1,626.1 |
B_Australian-3B + S_Daur-2B | Discordant | SGDP | 135,778,044 – 136,776,467 |
998,423.5 |
0.08599847 |
62 | 549.0421 | 2,258.5 |
B_Australian-3A + S_Piapoco-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1B + S_Somali-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Lahu-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
B_Australian-3B + S_Thai-1B | Discordant | SGDP | 135,760,098 – 136,776,467 |
1,016,369.5 |
0.09473490 |
61 | 564.6453 | 2,160.6 |
S_Russian-2A + S_Papuan-6A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Bougainville-1A + S_Mansi-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Turkish-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Bougainville-1A + S_Iranian-2A | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
36 | 575.9127 | 1,250.2 |
S_Chechen-1A + B_Crete-1A | Discordant | SGDP | 135,760,098 – 136,545,185 |
785,087.5 |
0.06065903 |
109 | 426.3692 | 5,112.9 |
S_Bougainville-1A + S_Mandenka-1A | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
49 | 575.9127 | 1,701.6 |
S_Tajik-1A + S_Orcadian-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Hawaiian-1A + S_Yi-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Palestinian-3B + S_Palestinian-2A | Discordant | SGDP | 135,760,098 – 137,851,404 |
2,091,306.5 |
1.21104218 |
163 | 1,973.6609 | 1,651.8 |
S_Hawaiian-1A + S_Ami-1B | Discordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
34 | 493.9515 | 1,376.7 |
S_Jordanian-1A + S_French-1A | Discordant | SGDP | 135,487,468 – 136,774,712 |
1,287,244.0 |
0.34466795 |
72 | 894.6115 | 1,609.6 |
S_Hawaiian-1A + S_Igorot-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Jordanian-1B + S_Makrani-1A | Discordant | SGDP | 135,340,792 – 136,762,052 |
1,421,259.5 |
0.38028236 |
81 | 987.4305 | 1,640.6 |
S_Hawaiian-1A + S_Madiga-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Quechua-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Hawaiian-1A + S_Karitiana-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_She-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Hawaiian-1B + S_Mixe-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Yadava-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Yadava-1A + S_Japanese-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Tuscan-1B | Discordant | SGDP | 135,340,792 – 136,762,052 |
1,421,259.5 |
0.38028236 |
42 | 987.4305 | 850.7 |
S_Yadava-1A + S_Korean-2A | Discordant | SGDP | 136,389,749 – 136,762,052 |
372,303.0 |
0.05395958 |
30 | 222.8731 | 2,692.1 |
S_Abkhasian-2A + S_Irula-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Yadava-1B + S_Thai-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Chechen-1A + S_Hazara-2A | Discordant | SGDP | 135,597,516 – 136,545,185 |
947,669.5 |
0.21920044 |
154 | 631.2417 | 4,879.3 |
S_Yadava-1B + S_Kinh-1B | Discordant | SGDP | 135,954,725 – 136,762,052 |
807,326.5 |
0.07313183 |
39 | 447.0222 | 1,744.9 |
S_Tajik-1A + S_Ulchi-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Yadava-1B + S_Georgian-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1A + S_Punjabi-3A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Balochi-1B + S_Cambodian-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1A + B_Papuan-15B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Luo-2A + S_BantuHerero-1A | Discordant | SGDP | 135,411,016 – 136,762,052 |
1,351,035.5 |
0.36655787 |
74 | 942.7433 | 1,569.9 |
S_Palestinian-3B + S_Brahui-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Luo-2A + S_Saharawi-1A | Discordant | SGDP | 136,389,749 – 136,785,841 |
396,092.0 |
0.06863806 |
31 | 246.0346 | 2,520.0 |
S_Palestinian-3B + S_Russian-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
39 | 552.7512 | 1,411.1 |
S_Luo-2A + S_Georgian-1A | Discordant | SGDP | 136,389,749 – 136,785,841 |
396,092.0 |
0.06863806 |
31 | 246.0346 | 2,520.0 |
S_Jordanian-1A + S_Burmese-1A | Discordant | SGDP | 136,545,177 – 136,774,712 |
229,534.5 |
0.03277184 |
32 | 137.3940 | 4,658.1 |
S_Luo-2A + S_Samaritan-1B | Discordant | SGDP | 136,389,749 – 136,785,841 |
396,092.0 |
0.06863806 |
30 | 246.0346 | 2,438.7 |
S_Jordanian-1A + S_Greek-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Luo-2A + S_Palestinian-2B | Discordant | SGDP | 136,389,749 – 136,762,052 |
372,303.0 |
0.05395958 |
28 | 222.8731 | 2,512.6 |
S_Jordanian-1B + S_Brahmin-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Sindhi-1A + S_Tuscan-2A | Discordant | SGDP | 135,340,792 – 136,774,712 |
1,433,919.5 |
0.38519553 |
36 | 997.4378 | 721.8 |
S_Jordanian-1B + S_Iranian-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Finnish-2A + S_Altaian-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Mozabite-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Finnish-2A + S_Khonda_Dora-1B | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
60 | 562.7585 | 2,132.4 |
S_Russian-2A + S_Tlingit-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Finnish-2A + S_Atayal-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Naxi-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
66 | 552.7512 | 2,388.1 |
S_Finnish-2A + S_Basque-2B | Discordant | SGDP | 136,545,177 – 136,774,712 |
229,534.5 |
0.03277184 |
36 | 137.3940 | 5,240.4 |
S_Russian-2A + S_Dusun-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Finnish-2A + S_Sardinian-1B | Discordant | SGDP | 136,500,227 – 137,040,522 |
540,294.5 |
0.40218015 |
32 | 582.0855 | 1,099.5 |
S_Russian-2A + S_Papuan-2A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
86 | 562.7585 | 3,056.4 |
S_Masai-2A + S_Luhya-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Albanian-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Greek-1B + S_Druze-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Druze-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Masai-1A + S_Papuan-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Russian-2A + S_Kyrgyz-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Masai-1A + S_Papuan-11A | Discordant | SGDP | 135,343,836 – 136,976,283 |
1,632,447.0 |
0.60553821 |
81 | 1,269.0051 | 1,276.6 |
S_Russian-2A + S_Karitiana-1A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Masai-1A + S_Papuan-7A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Abkhasian-2A + B_Crete-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Iraqi_Jew-2A + S_Sardinian-2A | Discordant | SGDP | 135,597,516 – 136,774,712 |
1,177,196.0 |
0.25197117 |
73 | 767.6310 | 1,902.0 |
S_Chechen-1A + S_Relli-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Iraqi_Jew-2B + S_Papuan-9A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Chechen-1A + S_Hazara-1A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
125 | 552.7512 | 4,522.8 |
S_Iraqi_Jew-2B + S_Armenian-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Chechen-1B + S_Icelandic-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Masai-1B + S_Bougainville-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
80 | 552.7512 | 2,894.6 |
S_Tajik-1A + S_Eskimo_Sireniki-1B | Discordant | SGDP | 135,760,098 – 136,545,185 |
785,087.5 |
0.06065903 |
62 | 426.3692 | 2,908.3 |
S_Masai-1B + S_Papuan-10B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1A + S_Japanese-3A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Masai-1B + S_Russian-2B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
71 | 552.7512 | 2,569.0 |
S_Tajik-1A + S_Jordanian-3A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Palestinian-3A + S_Bougainville-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1A + S_Tajik-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Palestinian-3A + S_Mala-3A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
37 | 552.7512 | 1,338.8 |
S_Tajik-1B + S_Altaian-1B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1B + S_Even-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1B + S_Aleut-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
B_Australian-3A + S_Yakut-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1B + S_Lahu-2A | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
B_Australian-3A + S_Tujia-2B | Discordant | SGDP | 136,545,177 – 136,545,185 |
8.0 |
0.00000111 |
4 | 1.0047 | 79,623.5 |
S_Tajik-1B + S_Abkhasian-1B | Discordant | SGDP | 136,545,177 – 136,762,052 |
216,874.5 |
0.02785868 |
30 | 127.3867 | 4,710.1 |
B_Australian-3A + S_Bengali-2A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
52 | 552.7512 | 1,881.5 |
Data shown in this table can be downloaded from this page.
α | Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
β | Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
Mean TMRCA | Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default. |
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