Ancestry shared between two individuals
Inference of the Cumulative Coalescent Function (CCF) between target and comparator genomes
Shared ancestry inference based on genomic data from the 1000 Genomes Project, phase 3 TGP ⇪
CCFs were computed using information from the Atlas of Variant Age, with allele age estimated using data from TGP alone and under the joint clock model
Target individual
HG03229Continental population: South Asian
SASPopulation group: Punjabi from Lahore, Pakistan
PJLComparator individual
HG01112Continental population: American
AMRPopulation group: Colombians from Medellin, Colombia
CLM-
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HG01879HG01880HG01882HG01883HG01885HG01886HG01889HG01890HG01894HG01896HG01912HG01914HG01915HG01956HG01958HG01985HG01986HG01988HG01989HG01990HG02009HG02010HG02012HG02013HG02014HG02051HG02052HG02053HG02054HG02095HG02107HG02108HG02111HG02143HG02144HG02255HG02256HG02281HG02282HG02283HG02284HG02307HG02308HG02309HG02314HG02315HG02317HG02318HG02322HG02323HG02325HG02330HG02332HG02334HG02337HG02339HG02343HG02419HG02420HG02427HG02429HG02433HG02439HG02442HG02445HG02449HG02450HG02455HG02470HG02471HG02476HG02477HG02479HG02481HG02484HG02485HG02489HG02496HG02497HG02501HG02502HG02505HG02508HG02511HG02536HG02537HG02541HG02545HG02546HG02549HG02554HG02555HG02557HG02558HG02577HG02580 -
NA19625NA19700NA19701NA19703NA19704NA19707NA19711NA19712NA19713NA19818NA19819NA19834NA19835NA19900NA19901NA19904NA19908NA19909NA19913NA19914NA19916NA19917NA19920NA19921NA19922NA19923NA19982NA19984NA19985NA20126NA20127NA20274NA20276NA20278NA20281NA20282NA20287NA20289NA20291NA20294NA20296NA20298NA20299NA20314NA20317NA20318NA20320NA20321NA20322NA20332NA20334NA20336NA20339NA20340NA20341NA20342NA20344NA20346NA20348NA20351NA20355NA20356NA20357NA20359NA20362NA20412 -
HG02922HG02923HG02938HG02941HG02943HG02944HG02946HG02947HG02952HG02953HG02968HG02970HG02971HG02973HG02974HG02976HG02977HG02979HG02981HG03099HG03100HG03103HG03105HG03108HG03109HG03111HG03112HG03114HG03115HG03117HG03118HG03120HG03121HG03123HG03124HG03126HG03127HG03129HG03130HG03132HG03133HG03135HG03136HG03139HG03157HG03159HG03160HG03162HG03163HG03166HG03168HG03169HG03172HG03175HG03189HG03190HG03193HG03195HG03196HG03198HG03199HG03202HG03265HG03267HG03268HG03270HG03271HG03279HG03280HG03291HG03294HG03295HG03297HG03298HG03300HG03301HG03303HG03304HG03311HG03313HG03342HG03343HG03351HG03352HG03354HG03363HG03366HG03367HG03369HG03370HG03372HG03499HG03511HG03514HG03515HG03517HG03518HG03520HG03521 -
HG02461HG02462HG02464HG02465HG02561HG02562HG02568HG02570HG02571HG02573HG02574HG02582HG02583HG02585HG02586HG02588HG02589HG02594HG02595HG02610HG02611HG02613HG02614HG02620HG02621HG02623HG02624HG02628HG02629HG02634HG02635HG02642HG02643HG02645HG02646HG02666HG02667HG02675HG02676HG02678HG02679HG02702HG02703HG02715HG02716HG02721HG02722HG02756HG02757HG02759HG02760HG02763HG02768HG02769HG02771HG02772HG02798HG02799HG02804HG02805HG02807HG02808HG02810HG02811HG02813HG02814HG02816HG02817HG02819HG02820HG02836HG02837HG02839HG02840HG02851HG02852HG02854HG02855HG02860HG02861HG02870HG02878HG02879HG02881HG02882HG02884HG02885HG02887HG02888HG02890HG02891HG02895HG02896HG02982HG02983HG03024HG03025HG03027HG03028HG03039HG03040HG03045HG03046HG03048HG03049HG03240HG03241HG03246HG03247HG03258HG03259HG03538HG03539 -
NA19017NA19019NA19020NA19023NA19024NA19025NA19026NA19027NA19028NA19030NA19031NA19035NA19036NA19037NA19038NA19041NA19042NA19043NA19307NA19308NA19309NA19310NA19311NA19312NA19313NA19314NA19315NA19316NA19317NA19318NA19319NA19320NA19321NA19323NA19324NA19327NA19328NA19331NA19332NA19334NA19338NA19346NA19347NA19350NA19351NA19355NA19360NA19372NA19374NA19375NA19376NA19377NA19378NA19379NA19380NA19383NA19384NA19385NA19390NA19391NA19393NA19394NA19395NA19397NA19399NA19401NA19403NA19404NA19428NA19429NA19430NA19431NA19434NA19435NA19436NA19437NA19438NA19439NA19440NA19443NA19445NA19446NA19448NA19449NA19451NA19452NA19454NA19455NA19456NA19457NA19461NA19462NA19463NA19466NA19467NA19468NA19471NA19472NA19473NA19474NA19475 -
HG03052HG03054HG03055HG03057HG03058HG03060HG03061HG03063HG03064HG03066HG03069HG03072HG03073HG03074HG03077HG03078HG03079HG03081HG03082HG03084HG03085HG03086HG03088HG03091HG03095HG03096HG03097HG03209HG03212HG03224HG03225HG03376HG03378HG03380HG03382HG03385HG03388HG03391HG03394HG03397HG03401HG03410HG03419HG03428HG03432HG03433HG03436HG03437HG03439HG03442HG03445HG03446HG03449HG03451HG03452HG03455HG03457HG03458HG03460HG03461HG03464HG03469HG03470HG03472HG03473HG03476HG03478HG03479HG03484HG03485HG03547HG03548HG03556HG03557HG03558HG03559HG03563HG03565HG03567HG03571HG03572HG03575HG03577HG03578HG03583 -
NA18486NA18488NA18489NA18498NA18499NA18501NA18502NA18504NA18505NA18507NA18508NA18510NA18511NA18516NA18517NA18519NA18520NA18522NA18523NA18853NA18856NA18858NA18861NA18864NA18865NA18867NA18868NA18870NA18871NA18873NA18874NA18876NA18877NA18878NA18879NA18881NA18907NA18908NA18909NA18910NA18912NA18915NA18916NA18917NA18923NA18924NA18933NA18934NA19092NA19093NA19095NA19096NA19098NA19099NA19102NA19107NA19108NA19113NA19114NA19116NA19117NA19118NA19119NA19121NA19129NA19130NA19131NA19137NA19138NA19141NA19143NA19144NA19146NA19147NA19149NA19152NA19153NA19159NA19160NA19171NA19172NA19175NA19184NA19185NA19189NA19190NA19197NA19198NA19200NA19201NA19204NA19206NA19207NA19209NA19210NA19213NA19214NA19222NA19223NA19225NA19235NA19236NA19238NA19239NA19240NA19247NA19248NA19256NA19257
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HG01112HG01113HG01119HG01121HG01122HG01124HG01125HG01130HG01131HG01133HG01134HG01136HG01137HG01139HG01140HG01142HG01148HG01149HG01250HG01251HG01253HG01254HG01256HG01257HG01259HG01260HG01269HG01271HG01272HG01275HG01277HG01280HG01281HG01284HG01341HG01342HG01344HG01345HG01348HG01350HG01351HG01353HG01354HG01356HG01357HG01359HG01360HG01362HG01363HG01365HG01366HG01369HG01372HG01374HG01375HG01377HG01378HG01383HG01384HG01389HG01390HG01431HG01432HG01435HG01437HG01438HG01440HG01441HG01443HG01444HG01447HG01455HG01456HG01459HG01461HG01462HG01464HG01465HG01468HG01474HG01479HG01485HG01486HG01488HG01489HG01491HG01492HG01494HG01495HG01497HG01498HG01550HG01551HG01556 -
NA19648NA19649NA19651NA19652NA19654NA19655NA19657NA19658NA19660NA19661NA19663NA19664NA19669NA19670NA19675NA19676NA19678NA19679NA19681NA19682NA19684NA19685NA19716NA19717NA19719NA19720NA19722NA19723NA19725NA19726NA19728NA19729NA19731NA19732NA19734NA19735NA19740NA19741NA19746NA19747NA19749NA19750NA19752NA19755NA19756NA19758NA19759NA19761NA19762NA19764NA19770NA19771NA19773NA19774NA19776NA19777NA19779NA19780NA19782NA19783NA19785NA19786NA19788NA19789NA19792NA19794NA19795 -
HG01565HG01566HG01571HG01572HG01577HG01578HG01892HG01893HG01917HG01918HG01920HG01921HG01923HG01924HG01926HG01927HG01932HG01933HG01935HG01936HG01938HG01939HG01941HG01942HG01944HG01945HG01947HG01948HG01950HG01951HG01953HG01954HG01961HG01965HG01967HG01968HG01970HG01971HG01973HG01974HG01976HG01977HG01979HG01980HG01982HG01983HG01991HG01992HG01997HG02002HG02003HG02006HG02008HG02089HG02090HG02102HG02104HG02105HG02146HG02147HG02150HG02252HG02253HG02259HG02260HG02262HG02265HG02266HG02271HG02272HG02274HG02275HG02277HG02278HG02285HG02286HG02291HG02292HG02298HG02299HG02301HG02304HG02312HG02345HG02348HG02425 -
HG00551HG00553HG00554HG00637HG00638HG00640HG00641HG00731HG00732HG00733HG00734HG00736HG00737HG00739HG00740HG00742HG00743HG01047HG01048HG01049HG01051HG01052HG01054HG01055HG01058HG01060HG01061HG01063HG01064HG01066HG01067HG01069HG01070HG01072HG01073HG01075HG01077HG01079HG01080HG01082HG01083HG01085HG01086HG01088HG01089HG01092HG01094HG01095HG01097HG01098HG01101HG01102HG01104HG01105HG01107HG01108HG01110HG01111HG01161HG01162HG01164HG01167HG01168HG01170HG01171HG01173HG01174HG01176HG01177HG01182HG01183HG01187HG01188HG01190HG01191HG01197HG01198HG01200HG01204HG01205HG01241HG01242HG01247HG01248HG01286HG01302HG01303HG01305HG01308HG01311HG01312HG01323HG01325HG01326HG01392HG01393HG01395HG01396HG01398HG01402HG01403HG01405HG01412HG01413HG01414
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HG00759HG00766HG00844HG00851HG00864HG00867HG00879HG00881HG00956HG00978HG00982HG01028HG01029HG01031HG01046HG01794HG01795HG01796HG01797HG01798HG01799HG01800HG01801HG01802HG01804HG01805HG01806HG01807HG01808HG01809HG01810HG01811HG01812HG01813HG01815HG01816HG01817HG02151HG02152HG02153HG02154HG02155HG02156HG02164HG02165HG02166HG02178HG02179HG02180HG02181HG02182HG02184HG02185HG02186HG02187HG02188HG02190HG02250HG02351HG02353HG02355HG02356HG02360HG02363HG02364HG02367HG02371HG02372HG02373HG02374HG02375HG02377HG02379HG02380HG02381HG02382HG02383HG02384HG02385HG02386HG02387HG02388HG02389HG02390HG02391HG02392HG02394HG02395HG02396HG02397HG02398HG02399HG02401HG02402HG02406HG02407HG02408HG02409HG02410 -
NA18525NA18526NA18528NA18530NA18531NA18532NA18533NA18534NA18535NA18536NA18537NA18538NA18539NA18541NA18542NA18543NA18544NA18545NA18546NA18547NA18548NA18549NA18550NA18552NA18553NA18555NA18557NA18558NA18559NA18560NA18561NA18562NA18563NA18564NA18565NA18566NA18567NA18570NA18571NA18572NA18573NA18574NA18577NA18579NA18582NA18591NA18592NA18593NA18595NA18596NA18597NA18599NA18602NA18603NA18605NA18606NA18608NA18609NA18610NA18611NA18612NA18613NA18614NA18615NA18616NA18617NA18618NA18619NA18620NA18621NA18622NA18623NA18624NA18625NA18626NA18627NA18628NA18629NA18630NA18631NA18632NA18633NA18634NA18635NA18636NA18637NA18638NA18639NA18640NA18641NA18642NA18643NA18644NA18645NA18646NA18647NA18648NA18740NA18745NA18747NA18748NA18749NA18757 -
HG00403HG00404HG00406HG00407HG00409HG00410HG00419HG00421HG00422HG00428HG00436HG00437HG00442HG00443HG00445HG00446HG00448HG00449HG00451HG00452HG00457HG00458HG00463HG00464HG00472HG00473HG00475HG00476HG00478HG00479HG00500HG00501HG00513HG00524HG00525HG00530HG00531HG00533HG00534HG00536HG00537HG00542HG00543HG00556HG00557HG00559HG00560HG00565HG00566HG00580HG00581HG00583HG00584HG00589HG00590HG00592HG00593HG00595HG00596HG00598HG00599HG00607HG00608HG00610HG00611HG00613HG00614HG00619HG00620HG00622HG00623HG00625HG00626HG00628HG00629HG00631HG00632HG00634HG00635HG00650HG00651HG00653HG00654HG00656HG00657HG00662HG00663HG00671HG00672HG00674HG00675HG00683HG00684HG00689HG00690HG00692HG00693HG00698HG00699HG00701HG00702HG00704HG00705HG00707HG00708HG00717HG00728HG00729 -
NA18939NA18940NA18941NA18942NA18943NA18944NA18945NA18946NA18947NA18948NA18949NA18950NA18951NA18952NA18953NA18954NA18956NA18957NA18959NA18960NA18961NA18962NA18963NA18964NA18965NA18966NA18967NA18968NA18969NA18970NA18971NA18972NA18973NA18974NA18975NA18976NA18977NA18978NA18979NA18980NA18981NA18982NA18983NA18984NA18985NA18986NA18987NA18988NA18989NA18990NA18991NA18992NA18993NA18994NA18995NA18997NA18998NA18999NA19000NA19001NA19002NA19003NA19004NA19005NA19006NA19007NA19009NA19010NA19011NA19012NA19054NA19055NA19056NA19057NA19058NA19059NA19060NA19062NA19063NA19064NA19065NA19066NA19067NA19068NA19070NA19072NA19074NA19075NA19076NA19077NA19078NA19079NA19080NA19081NA19082NA19083NA19084NA19085NA19086NA19087NA19088NA19089NA19090NA19091 -
HG01595HG01596HG01597HG01598HG01599HG01600HG01840HG01841HG01842HG01843HG01844HG01845HG01846HG01847HG01848HG01849HG01850HG01851HG01852HG01853HG01855HG01857HG01858HG01859HG01860HG01861HG01862HG01863HG01864HG01865HG01866HG01867HG01868HG01869HG01870HG01871HG01872HG01873HG01874HG01878HG02016HG02017HG02019HG02020HG02023HG02024HG02025HG02026HG02028HG02029HG02031HG02032HG02035HG02040HG02046HG02047HG02048HG02049HG02050HG02057HG02058HG02060HG02061HG02064HG02067HG02069HG02070HG02072HG02073HG02075HG02076HG02078HG02079HG02081HG02082HG02084HG02085HG02086HG02087HG02088HG02113HG02116HG02121HG02122HG02127HG02128HG02130HG02131HG02133HG02134HG02136HG02137HG02138HG02139HG02140HG02141HG02142HG02512HG02513HG02521HG02522
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NA06984NA06985NA06986NA06989NA06994NA07000NA07037NA07048NA07051NA07056NA07347NA07357NA10847NA10851NA11829NA11830NA11831NA11832NA11840NA11843NA11881NA11892NA11893NA11894NA11918NA11919NA11920NA11930NA11931NA11932NA11933NA11992NA11994NA11995NA12003NA12004NA12005NA12006NA12043NA12044NA12045NA12046NA12058NA12144NA12154NA12155NA12156NA12234NA12249NA12272NA12273NA12275NA12282NA12283NA12286NA12287NA12340NA12341NA12342NA12347NA12348NA12383NA12399NA12400NA12413NA12414NA12489NA12546NA12716NA12717NA12718NA12748NA12749NA12750NA12751NA12760NA12761NA12762NA12763NA12775NA12776NA12777NA12778NA12812NA12813NA12814NA12815NA12827NA12828NA12829NA12830NA12842NA12843NA12872NA12873NA12874NA12878NA12889NA12890 -
HG00171HG00173HG00174HG00176HG00177HG00178HG00179HG00180HG00181HG00182HG00183HG00185HG00186HG00187HG00188HG00189HG00190HG00266HG00267HG00268HG00269HG00271HG00272HG00273HG00274HG00275HG00276HG00277HG00278HG00280HG00281HG00282HG00284HG00285HG00288HG00290HG00304HG00306HG00308HG00309HG00310HG00311HG00313HG00315HG00318HG00319HG00320HG00321HG00323HG00324HG00325HG00326HG00327HG00328HG00329HG00330HG00331HG00332HG00334HG00335HG00336HG00337HG00338HG00339HG00341HG00342HG00343HG00344HG00345HG00346HG00349HG00350HG00351HG00353HG00355HG00356HG00357HG00358HG00360HG00361HG00362HG00364HG00365HG00366HG00367HG00368HG00369HG00371HG00372HG00373HG00375HG00376HG00378HG00379HG00380HG00381HG00382HG00383HG00384 -
HG00096HG00097HG00099HG00100HG00101HG00102HG00103HG00105HG00106HG00107HG00108HG00109HG00110HG00111HG00112HG00113HG00114HG00115HG00116HG00117HG00118HG00119HG00120HG00121HG00122HG00123HG00124HG00125HG00126HG00127HG00128HG00129HG00130HG00131HG00132HG00133HG00136HG00137HG00138HG00139HG00140HG00141HG00142HG00143HG00145HG00146HG00148HG00149HG00150HG00151HG00154HG00155HG00157HG00158HG00159HG00160HG00231HG00232HG00233HG00234HG00235HG00236HG00237HG00238HG00239HG00240HG00242HG00243HG00244HG00245HG00246HG00250HG00251HG00252HG00253HG00254HG00255HG00256HG00257HG00258HG00259HG00260HG00261HG00262HG00263HG00264HG00265HG01334HG01789HG01790HG01791HG02215 -
HG01500HG01501HG01503HG01504HG01506HG01507HG01509HG01510HG01512HG01513HG01515HG01516HG01518HG01519HG01521HG01522HG01524HG01525HG01527HG01528HG01530HG01531HG01536HG01537HG01602HG01603HG01605HG01606HG01607HG01608HG01610HG01612HG01613HG01615HG01617HG01618HG01619HG01620HG01623HG01624HG01625HG01626HG01628HG01630HG01631HG01632HG01668HG01669HG01670HG01672HG01673HG01675HG01676HG01678HG01679HG01680HG01682HG01684HG01685HG01686HG01694HG01695HG01697HG01699HG01700HG01702HG01704HG01705HG01707HG01708HG01709HG01710HG01746HG01747HG01756HG01757HG01761HG01762HG01765HG01766HG01767HG01768HG01770HG01771HG01773HG01775HG01776HG01777HG01779HG01781HG01783HG01784HG01785HG01786HG02219HG02220HG02221HG02223HG02224HG02230HG02231HG02232HG02233HG02235HG02236HG02238HG02239 -
NA20502NA20503NA20504NA20505NA20506NA20507NA20508NA20509NA20510NA20511NA20512NA20513NA20514NA20515NA20516NA20517NA20518NA20519NA20520NA20521NA20522NA20524NA20525NA20526NA20527NA20528NA20529NA20530NA20531NA20532NA20533NA20534NA20535NA20536NA20538NA20539NA20540NA20541NA20542NA20543NA20544NA20581NA20582NA20585NA20586NA20587NA20588NA20589NA20752NA20753NA20754NA20755NA20756NA20757NA20758NA20759NA20760NA20761NA20762NA20763NA20764NA20765NA20766NA20767NA20768NA20769NA20770NA20771NA20772NA20773NA20774NA20775NA20778NA20783NA20785NA20786NA20787NA20790NA20792NA20795NA20796NA20797NA20798NA20799NA20800NA20801NA20802NA20803NA20804NA20805NA20806NA20807NA20808NA20809NA20810NA20811NA20812NA20813NA20814NA20815NA20818NA20819NA20821NA20822NA20826NA20827NA20828NA20832
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HG03006HG03007HG03009HG03012HG03585HG03589HG03593HG03594HG03595HG03598HG03600HG03603HG03604HG03607HG03611HG03615HG03616HG03793HG03796HG03800HG03802HG03803HG03805HG03808HG03809HG03812HG03814HG03815HG03817HG03821HG03823HG03824HG03826HG03829HG03830HG03832HG03833HG03902HG03905HG03907HG03908HG03910HG03911HG03913HG03914HG03916HG03917HG03919HG03920HG03922HG03925HG03926HG03928HG03931HG03934HG03937HG03940HG03941HG04131HG04134HG04140HG04141HG04144HG04146HG04152HG04153HG04155HG04156HG04158HG04159HG04161HG04162HG04164HG04171HG04173HG04176HG04177HG04180HG04182HG04183HG04185HG04186HG04188HG04189HG04194HG04195 -
NA20845NA20846NA20847NA20849NA20850NA20851NA20852NA20853NA20854NA20856NA20858NA20859NA20861NA20862NA20863NA20864NA20866NA20867NA20868NA20869NA20870NA20871NA20872NA20874NA20875NA20876NA20877NA20878NA20881NA20882NA20884NA20885NA20886NA20887NA20888NA20889NA20890NA20891NA20892NA20893NA20894NA20895NA20896NA20897NA20898NA20899NA20900NA20901NA20902NA20903NA20904NA20905NA20906NA20908NA20910NA20911NA21086NA21087NA21088NA21089NA21090NA21091NA21092NA21093NA21094NA21095NA21097NA21098NA21099NA21100NA21101NA21102NA21103NA21104NA21105NA21106NA21107NA21108NA21109NA21110NA21111NA21112NA21113NA21114NA21115NA21116NA21117NA21118NA21119NA21120NA21122NA21123NA21124NA21125NA21126NA21127NA21128NA21129NA21130NA21133NA21135NA21137NA21141NA21142NA21143NA21144 -
HG03713HG03714HG03715HG03716HG03717HG03718HG03720HG03722HG03727HG03729HG03730HG03731HG03742HG03770HG03771HG03772HG03773HG03774HG03775HG03777HG03778HG03779HG03780HG03781HG03782HG03784HG03785HG03786HG03787HG03788HG03789HG03790HG03792HG03861HG03862HG03863HG03864HG03866HG03867HG03868HG03869HG03870HG03871HG03872HG03873HG03874HG03875HG03882HG03960HG03963HG03965HG03967HG03968HG03969HG03971HG03973HG03974HG03976HG03977HG03978HG04001HG04002HG04014HG04015HG04017HG04018HG04019HG04020HG04022HG04023HG04025HG04026HG04054HG04056HG04059HG04060HG04061HG04062HG04063HG04070HG04076HG04080HG04090HG04093HG04094HG04096HG04098HG04118HG04198HG04200HG04202HG04206HG04209HG04211HG04212HG04214HG04216HG04219HG04222HG04225HG04235HG04238HG04239 -
HG01583HG01586HG01589HG01593HG02490HG02491HG02493HG02494HG02597HG02600HG02601HG02603HG02604HG02648HG02649HG02651HG02652HG02654HG02655HG02657HG02658HG02660HG02661HG02681HG02682HG02684HG02685HG02687HG02688HG02690HG02691HG02694HG02696HG02697HG02699HG02700HG02724HG02725HG02727HG02728HG02731HG02733HG02734HG02736HG02737HG02774HG02775HG02778HG02780HG02783HG02784HG02786HG02787HG02789HG02790HG02792HG02793HG03015HG03016HG03018HG03019HG03021HG03022HG03228HG03229HG03234HG03235HG03237HG03238HG03488HG03490HG03491HG03619HG03624HG03625HG03629HG03631HG03634HG03636HG03640HG03649HG03652HG03653HG03660HG03663HG03667HG03668HG03702HG03703HG03705HG03706HG03708HG03709HG03762HG03765HG03767 -
HG03642HG03643HG03644HG03645HG03646HG03672HG03673HG03679HG03680HG03681HG03684HG03685HG03686HG03687HG03689HG03690HG03691HG03692HG03693HG03694HG03695HG03696HG03697HG03698HG03711HG03733HG03736HG03738HG03740HG03741HG03743HG03744HG03745HG03746HG03750HG03752HG03753HG03754HG03755HG03756HG03757HG03760HG03836HG03837HG03838HG03844HG03846HG03848HG03849HG03850HG03851HG03854HG03856HG03857HG03858HG03884HG03885HG03886HG03887HG03888HG03890HG03894HG03895HG03896HG03897HG03898HG03899HG03900HG03943HG03944HG03945HG03947HG03948HG03949HG03950HG03951HG03953HG03955HG03985HG03986HG03989HG03990HG03991HG03995HG03998HG03999HG04003HG04006HG04029HG04033HG04035HG04038HG04039HG04042HG04047HG04075HG04099HG04100HG04106HG04107HG04210HG04227HG04229
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Cumulative Coalescent Function (CCF)
How to interpret this figure?
Showing the inferred fraction of the genome shared between chromosome pairs
Download this figure in PNG format
Data shown in this figure can be downloaded from this page.
| CCF | The cumulative coalescent function (CCF) describes the fraction a given target genome shares with a comparator genome due to common ancestry; the curve is monotonically increasing back in time. The CCF was inferred using a dynamic programming method which takes the alleles carried by the target genome, compares those to the alleles carried by the comparator genome, and infers the CCF based on the estimated age of the shared alleles. Here, allele age estimated using the joint clock model was applied throughout. |
| Haplotypes A, B | The CCF is computed from the alleles shared between two haploid genomes; i.e. between the phased chromosomes of diploid individuals. Here, these are distnguished by arbitrarily (but consistently within a data set) labelling chromosomes as "A" and "B" per individual. |
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The human.genome.dating database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.
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Patrick K. Albers
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