Genealogical Estimation of Variant Age (GEVA)
Inference of the ancestral origin of a genetic variant at a single locus
Unmatched Variant ID, using internal ID instead:
X436597809
Alleles:
reference
C–
alternate
A–
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
Chromosome
2
position 136,597,809
(GRCh37)
Allele frequency in SGDP ⇪
Sample | 79.3% |
20.7% |
|
AFR |
81.8% |
18.2% |
|
AMR |
95.5% |
4.5% |
|
CAS |
92.6% |
7.4% |
|
EAS |
81.9% |
18.1% |
|
OCN |
62.0% |
38.0% |
|
SAS |
81.6% |
18.4% |
|
WEA |
71.3% |
28.7% |
|
reference | ← allele frequency → | alternate |
Select clock model
Age estimation summary
Data source | Estimated age of A allele |
# pairs = concordant + discordant | Quality score |
---|---|---|---|
Genomes in SGDP | 19,375.9 generations | 198 = 99 + 99 | 0.545 |
Pairwise results table
Haplotype pair | Pair type | Data source | Breakpoint positions | Physical length (bp) | Genetic Length (cM) | α | β | Mean TMRCA (generations) |
---|---|---|---|---|---|---|---|---|
S_Madiga-2B + S_Greek-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Luo-2B + S_Igorot-2A | Concordant | SGDP | 136,597,712 – 136,617,937 |
20,224.5 |
0.00163067 |
3 | 2.3045 | 26,035.6 |
S_Dinka-2B + S_Iraqi_Jew-2A | Concordant | SGDP | 136,568,364 – 136,762,052 |
193,688.0 |
0.02140992 |
3 | 18.1279 | 3,309.8 |
S_Hawaiian-1B + S_Basque-2A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Iraqi_Jew-2B + S_Turkish-1B | Concordant | SGDP | 135,340,792 – 136,777,106 |
1,436,313.5 |
0.38697604 |
3 | 310.5808 | 193.2 |
S_Tuscan-1B + B_Papuan-15B | Concordant | SGDP | 136,556,679 – 136,646,325 |
89,645.5 |
0.01530590 |
3 | 13.2447 | 4,530.1 |
S_Tlingit-1B + S_Bougainville-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Masai-2B + S_Sindhi-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
3 | 71.8133 | 835.5 |
S_Tlingit-2B + S_Ami-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Tlingit-2B + S_Tuscan-2A | Concordant | SGDP | 135,340,792 – 136,777,106 |
1,436,313.5 |
0.38697604 |
3 | 310.5808 | 193.2 |
S_Quechua-2B + S_Samaritan-1B | Concordant | SGDP | 136,389,477 – 136,774,712 |
385,235.0 |
0.06054593 |
3 | 49.4367 | 1,213.7 |
S_BantuHerero-1A + S_Tuscan-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
3 | 71.8133 | 835.5 |
S_BantuHerero-1A + S_Masai-2B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Saharawi-1A + S_Karitiana-1B | Concordant | SGDP | 136,389,477 – 136,774,712 |
385,235.0 |
0.06054593 |
3 | 49.4367 | 1,213.7 |
S_Naxi-2B + S_Basque-2A | Concordant | SGDP | 136,587,680 – 136,649,985 |
62,305.0 |
0.01255858 |
3 | 11.0469 | 5,431.4 |
S_Masai-2A + S_Mandenka-1A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
3 | 71.8133 | 835.5 |
S_Naxi-2B + S_Icelandic-2A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Masai-1A + B_Australian-4B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Hezhen-1A + S_Naxi-1B | Concordant | SGDP | 135,462,809 – 136,822,338 |
1,359,529.5 |
0.43034524 |
3 | 345.2762 | 173.8 |
S_Masai-1B + S_Irula-2A | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
3 | 64.8977 | 924.5 |
S_Hezhen-1A + S_Thai-2A | Concordant | SGDP | 135,954,725 – 136,762,052 |
807,326.5 |
0.07313183 |
3 | 59.5055 | 1,008.3 |
S_Mandenka-1A + B_Australian-3A | Concordant | SGDP | 135,636,692 – 136,785,841 |
1,149,148.5 |
0.25364512 |
3 | 203.9161 | 294.2 |
S_Naxi-1B + S_Relli-1B | Concordant | SGDP | 136,587,680 – 136,649,985 |
62,305.0 |
0.01255858 |
3 | 11.0469 | 5,431.4 |
S_Hawaiian-1A + S_Albanian-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Naxi-1B + S_Palestinian-3A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Yadava-1A + S_Tuscan-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
3 | 45.5062 | 1,318.5 |
S_Naxi-1B + S_Russian-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Sindhi-1A + S_Greek-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Naxi-1B + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Albanian-1B + S_Basque-2B | Concordant | SGDP | 136,557,025 – 136,762,052 |
205,026.5 |
0.02261269 |
3 | 19.0902 | 3,143.0 |
S_Naxi-1B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
3 | 27.9656 | 2,145.5 |
S_Masai-2A + S_Mala-3A | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
3 | 71.8133 | 835.5 |
S_She-1A + S_Balochi-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Georgian-2B + S_Chechen-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
3 | 45.5062 | 1,318.5 |
S_She-1A + S_Greek-2A | Concordant | SGDP | 135,760,098 – 136,822,338 |
1,062,240.5 |
0.17379654 |
3 | 140.0372 | 428.5 |
S_Hungarian-1A + B_Crete-2B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_She-1A + S_Iraqi_Jew-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Masai-1A + S_Basque-2B | Concordant | SGDP | 136,557,025 – 137,040,522 |
483,496.5 |
0.39241993 |
3 | 314.9359 | 190.5 |
S_She-1B + S_Hazara-2B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Samaritan-1B + S_Palestinian-3A | Concordant | SGDP | 135,352,905 – 136,785,841 |
1,432,936.0 |
0.38510046 |
3 | 309.0804 | 194.1 |
S_She-1B + S_Albanian-1B | Concordant | SGDP | 136,589,238 – 136,649,985 |
60,747.5 |
0.01204739 |
3 | 10.6379 | 5,640.2 |
S_Palestinian-2B + S_Russian-2B | Concordant | SGDP | 136,290,439 – 136,777,106 |
486,667.0 |
0.07086028 |
3 | 57.6882 | 1,040.1 |
S_She-1B + S_Hungarian-1A | Concordant | SGDP | 136,594,085 – 136,649,985 |
55,900.5 |
0.01137947 |
3 | 10.1036 | 5,938.5 |
S_Russian-1B + S_Lezgin-1B | Concordant | SGDP | 135,760,098 – 136,777,106 |
1,017,008.0 |
0.09521026 |
3 | 77.1682 | 777.5 |
S_She-1B + S_Jordanian-1A | Concordant | SGDP | 136,587,680 – 136,649,985 |
62,305.0 |
0.01255858 |
3 | 11.0469 | 5,431.4 |
S_Mandenka-1B + S_Palestinian-3A | Concordant | SGDP | 135,760,098 – 136,784,130 |
1,024,032.0 |
0.10025333 |
3 | 81.2027 | 738.9 |
S_Korean-2A + S_Igorot-2B | Concordant | SGDP | 136,597,712 – 136,617,937 |
20,224.5 |
0.00163067 |
3 | 2.3045 | 26,035.6 |
S_Dinka-1A + S_Iraqi_Jew-2A | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Korean-1A + S_Albanian-1B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
3 | 71.8133 | 835.5 |
S_Hawaiian-1A + S_Turkish-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Burmese-1A + S_Dusun-1B | Concordant | SGDP | 136,555,141 – 136,785,841 |
230,699.5 |
0.04069738 |
3 | 33.5579 | 1,788.0 |
S_Yadava-1A + S_Sardinian-1B | Concordant | SGDP | 136,500,227 – 136,762,052 |
261,824.5 |
0.03237291 |
3 | 26.8983 | 2,230.6 |
S_Burmese-1A + S_Palestinian-3A | Concordant | SGDP | 136,555,141 – 136,774,712 |
219,570.5 |
0.03093206 |
3 | 25.7456 | 2,330.5 |
S_Khonda_Dora-1B + S_Abkhasian-2A | Concordant | SGDP | 136,391,342 – 136,642,220 |
250,878.5 |
0.04378360 |
3 | 36.0269 | 1,665.4 |
S_Burmese-1B + B_Crete-2B | Concordant | SGDP | 136,078,562 – 136,774,712 |
696,149.5 |
0.07454952 |
3 | 60.6396 | 989.5 |
S_Luo-2A + S_Daur-2B | Concordant | SGDP | 135,878,523 – 136,774,712 |
896,188.5 |
0.08178135 |
3 | 66.4251 | 903.3 |
B_Australian-3A + S_Irula-2A | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
3 | 64.8977 | 924.5 |
S_Luo-2B + S_Papuan-10A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
3 | 27.9656 | 2,145.5 |
B_Australian-3A + S_Finnish-2A | Concordant | SGDP | 135,760,098 – 136,777,106 |
1,017,008.0 |
0.09521026 |
3 | 77.1682 | 777.5 |
S_Luo-2B + S_Russian-2B | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
3 | 27.9656 | 2,145.5 |
B_Australian-3B + B_Papuan-15B | Concordant | SGDP | 136,556,679 – 136,649,985 |
93,306.0 |
0.01683084 |
3 | 14.4647 | 4,148.0 |
S_Armenian-2A + S_Palestinian-2B | Concordant | SGDP | 136,389,477 – 136,777,106 |
387,629.0 |
0.06232644 |
3 | 50.8612 | 1,179.7 |
B_Australian-4B + S_Dusun-1B | Concordant | SGDP | 136,032,499 – 136,774,712 |
742,212.5 |
0.07617419 |
3 | 61.9393 | 968.7 |
S_Finnish-2A + B_Papuan-15B | Concordant | SGDP | 136,556,679 – 136,649,985 |
93,306.0 |
0.01683084 |
3 | 14.4647 | 4,148.0 |
B_Australian-4B + S_Sardinian-1B | Concordant | SGDP | 136,500,227 – 136,785,841 |
285,613.5 |
0.04705139 |
3 | 38.6411 | 1,552.8 |
S_Masai-2A + S_Russian-2A | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
3 | 41.0443 | 1,461.8 |
S_Dusun-1B + S_Albanian-1B | Concordant | SGDP | 135,993,765 – 136,762,052 |
768,286.5 |
0.07200356 |
3 | 58.6028 | 1,023.8 |
S_Georgian-2B + S_Tuscan-1B | Concordant | SGDP | 136,389,477 – 136,777,106 |
387,629.0 |
0.06232644 |
3 | 50.8612 | 1,179.7 |
S_Papuan-1A + S_Palestinian-2B | Concordant | SGDP | 136,389,477 – 136,777,106 |
387,629.0 |
0.06232644 |
3 | 50.8612 | 1,179.7 |
S_Georgian-2B + B_Crete-1B | Concordant | SGDP | 136,497,639 – 136,785,841 |
288,202.0 |
0.04752747 |
3 | 39.0220 | 1,537.6 |
S_Papuan-1A + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
3 | 38.5906 | 1,554.8 |
S_Masai-2B + B_Crete-1B | Concordant | SGDP | 136,497,639 – 136,762,052 |
264,413.0 |
0.03284899 |
3 | 27.2792 | 2,199.5 |
S_Papuan-10A + S_Balochi-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Hungarian-1B + B_Crete-2B | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
3 | 64.8977 | 924.5 |
S_Papuan-10A + S_Iraqi_Jew-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Masai-1A + S_Armenian-2A | Concordant | SGDP | 135,760,098 – 136,777,106 |
1,017,008.0 |
0.09521026 |
3 | 77.1682 | 777.5 |
S_Papuan-10A + S_Russian-2B | Concordant | SGDP | 135,636,692 – 136,777,106 |
1,140,413.5 |
0.24566032 |
3 | 197.5283 | 303.8 |
S_Iraqi_Jew-2B + S_Iraqi_Jew-1A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Papuan-6B + S_Igorot-2A | Concordant | SGDP | 136,597,712 – 136,617,937 |
20,224.5 |
0.00163067 |
3 | 2.3045 | 26,035.6 |
S_Iraqi_Jew-1B + S_Lezgin-1B | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Papuan-6B + S_Samaritan-1B | Concordant | SGDP | 136,389,477 – 136,785,841 |
396,364.0 |
0.07031125 |
3 | 57.2490 | 1,048.1 |
S_Masai-1B + S_Dusun-1B | Concordant | SGDP | 136,391,342 – 136,762,052 |
370,710.0 |
0.05242810 |
3 | 42.9425 | 1,397.2 |
S_Papuan-7B + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
3 | 45.5062 | 1,318.5 |
S_Druze-1B + S_Abkhasian-2A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
3 | 38.5906 | 1,554.8 |
S_Gambian-2A + S_Dai-3B | Concordant | SGDP | 136,556,012 – 136,762,052 |
206,039.5 |
0.02454909 |
3 | 20.6393 | 2,907.1 |
S_Luo-1A + S_Hungarian-1B | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
3 | 64.8977 | 924.5 |
S_Gambian-2A + S_Masai-1B | Concordant | SGDP | 136,488,251 – 136,777,106 |
288,855.0 |
0.04174595 |
3 | 34.3968 | 1,744.4 |
S_Jordanian-1A + S_Abkhasian-2B | Concordant | SGDP | 135,597,516 – 136,785,841 |
1,188,325.0 |
0.26173649 |
3 | 210.3892 | 285.2 |
S_Igorot-1A + S_Jordanian-1A | Concordant | SGDP | 136,597,712 – 136,617,937 |
20,224.5 |
0.00163067 |
3 | 2.3045 | 26,035.6 |
S_Mandenka-1A + S_Altaian-1A | Concordant | SGDP | 135,597,516 – 136,777,106 |
1,179,590.0 |
0.25375168 |
3 | 204.0013 | 294.1 |
S_Igorot-1A + S_Russian-2B | Concordant | SGDP | 136,597,712 – 136,598,649 |
936.5 |
0.00015059 |
3 | 1.1205 | 53,549.1 |
S_Mandenka-1A + S_Lezgin-1B | Concordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
3 | 83.5561 | 718.1 |
S_Igorot-1B + S_Balochi-1B | Concordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Dinka-2B + S_Tujia-2A | Concordant | SGDP | 136,568,364 – 136,762,052 |
193,688.0 |
0.02140992 |
3 | 18.1279 | 3,309.8 |
S_Igorot-2A + S_Greek-2A | Concordant | SGDP | 136,597,712 – 136,598,649 |
936.5 |
0.00015059 |
3 | 1.1205 | 53,549.1 |
S_Dinka-2B + S_Iraqi_Jew-1A | Concordant | SGDP | 136,578,646 – 136,762,052 |
183,405.5 |
0.02105259 |
3 | 17.8421 | 3,362.8 |
S_Karitiana-1B + S_Hungarian-1A | Concordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Mozabite-1A + S_Sindhi-1B | Concordant | SGDP | 135,487,468 – 136,777,106 |
1,289,638.0 |
0.34644846 |
3 | 278.1588 | 215.7 |
S_Mozabite-1A + S_Finnish-2B | Concordant | SGDP | 135,760,098 – 136,777,106 |
1,017,008.0 |
0.09521026 |
3 | 77.1682 | 777.5 |
S_Igorot-2A + S_Yemenite_Jew-2B | Discordant | SGDP | 136,389,749 – 136,597,824 |
208,075.5 |
0.03657819 |
3 | 30.2626 | 1,982.6 |
S_Igorot-2A + S_Yakut-1A | Discordant | SGDP | 136,589,238 – 136,822,937 |
233,699.0 |
0.10779321 |
3 | 87.2346 | 687.8 |
S_Igorot-1B + S_Yi-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Dinka-2B + S_Finnish-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2B + S_Pima-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2B + S_Tubalar-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2A + S_Mixtec-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Ulchi-2A | Discordant | SGDP | 136,389,749 – 136,597,824 |
208,075.5 |
0.03657819 |
3 | 30.2626 | 1,982.6 |
S_Naxi-2B + S_Mixtec-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Naxi-2B + S_Zapotec-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Tlingit-2B + S_Iranian-1A | Discordant | SGDP | 136,108,186 – 136,822,338 |
714,152.0 |
0.15327898 |
3 | 123.6232 | 485.3 |
S_Yakut-2B + S_Japanese-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Altaian-1A + S_Atayal-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Quechua-2B + S_Kyrgyz-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-2B + S_Bougainville-2A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
3 | 75.7438 | 792.1 |
S_Hawaiian-1B + S_Altaian-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Aleut-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2A + S_Bengali-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Cambodian-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2B + S_Burusho-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Han-2B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Iranian-2A + S_Mansi-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Miao-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Papuan-6B + S_Papuan-2A | Discordant | SGDP | 135,343,836 – 137,346,449 |
2,002,613.0 |
1.13968931 |
3 | 912.7515 | 65.7 |
S_Naxi-2B + S_Papuan-8B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Igorot-1B + S_Papuan-14B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Papuan-9A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Igorot-2A + S_Han-1A | Discordant | SGDP | 136,070,592 – 136,597,824 |
527,232.0 |
0.05352117 |
3 | 43.8169 | 1,369.3 |
S_Naxi-2B + S_Chukchi-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-2B + S_Oroqen-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Kapu-1A | Discordant | SGDP | 135,597,516 – 136,597,824 |
1,000,308.5 |
0.22967662 |
3 | 184.7413 | 324.8 |
S_Igorot-2B + S_Kusunda-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Mala-3B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Sindhi-1A + S_Brahui-2A | Discordant | SGDP | 135,340,792 – 136,785,841 |
1,445,048.5 |
0.39496084 |
3 | 316.9687 | 189.3 |
S_Naxi-2B + S_Madiga-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2A + S_Uygur-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Madiga-2A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2A + S_Yemenite_Jew-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Punjabi-2A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2B + S_Xibo-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Punjabi-1A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2B + B_Crete-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Saami-2B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Greek-2A + S_French-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_French-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Dinka-2B + S_Chukchi-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Naxi-2B + S_Tajik-2A | Discordant | SGDP | 136,494,791 – 136,597,824 |
103,033.0 |
0.01608023 |
3 | 13.8642 | 4,327.7 |
S_Naxi-2B + B_Han-3B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Naxi-2B + B_Yoruba-3A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Igorot-1A + S_Palestinian-1A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Naxi-2B + S_Chane-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-1B + S_Papuan-11A | Discordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
3 | 66.8055 | 898.1 |
S_Naxi-2B + S_Mayan-2A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Igorot-1B + S_Makrani-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Dai-3B + S_Quechua-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Igorot-2A + S_Ulchi-2B | Discordant | SGDP | 136,389,749 – 136,597,824 |
208,075.5 |
0.03657819 |
3 | 30.2626 | 1,982.6 |
S_Dai-3B + S_Thai-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-2A + S_Thai-1A | Discordant | SGDP | 135,726,038 – 136,597,824 |
871,786.0 |
0.20864227 |
3 | 167.9138 | 357.3 |
S_Daur-2B + S_Bengali-2A | Discordant | SGDP | 135,597,516 – 136,776,467 |
1,178,951.5 |
0.25327631 |
3 | 203.6210 | 294.7 |
S_Igorot-2A + B_Crete-1A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Hezhen-2A + S_Hazara-1A | Discordant | SGDP | 135,760,098 – 137,760,080 |
1,999,982.5 |
1.11200379 |
3 | 890.6030 | 67.4 |
S_Igorot-2B + S_Hezhen-2B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_She-1A + S_Aleut-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-2B + S_Papuan-8B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_She-1A + S_Papuan-10B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Igorot-2B + S_Russian-1A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_She-1A + S_Papuan-4A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Balochi-1B + S_Japanese-3A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_She-1A + S_Brahmin-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Armenian-2A + S_Sardinian-2A | Discordant | SGDP | 135,760,098 – 136,781,557 |
1,021,459.5 |
0.09819052 |
3 | 79.5524 | 754.2 |
S_She-1B + S_Mixtec-2B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2A + S_Naxi-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_She-1B + S_Lahu-1A | Discordant | SGDP | 136,594,085 – 136,649,985 |
55,900.5 |
0.01137947 |
3 | 10.1036 | 5,938.5 |
S_Basque-2A + S_Dusun-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_She-1B + S_Japanese-2B | Discordant | SGDP | 136,401,507 – 136,597,824 |
196,317.0 |
0.03284773 |
3 | 27.2782 | 2,199.6 |
S_Basque-2A + S_Atayal-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_She-1B + S_Ami-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2A + B_Sardinian-3A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_She-1B + S_Papuan-13A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2B + S_Cambodian-1B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_She-1B + S_Irula-2B | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2B + S_Mansi-2B | Discordant | SGDP | 136,557,025 – 136,774,712 |
217,686.5 |
0.02752585 |
3 | 23.0207 | 2,606.4 |
S_She-1B + S_Surui-1A | Discordant | SGDP | 135,760,098 – 136,597,824 |
837,726.5 |
0.07113520 |
3 | 57.9082 | 1,036.1 |
S_Basque-2B + S_Lezgin-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Korean-2A + S_Mixe-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Basque-2B + S_Pima-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Ami-1B + S_Khonda_Dora-1A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Greek-2A + S_Makrani-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Thai-1B + S_Cambodian-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Hungarian-1B + S_Tu-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Thai-1B + S_Tujia-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Luo-1A + B_Dinka-3A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Thai-2A + S_Burmese-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Dinka-2B + S_Estonian-1B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Papuan-1A + S_Papuan-11A | Discordant | SGDP | 135,171,548 – 137,040,044 |
1,868,496.0 |
1.01473209 |
3 | 812.7857 | 73.8 |
S_Dinka-2B + S_Finnish-3A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Dinka-2B + S_Tuscan-2B | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Dinka-2B + S_Yemenite_Jew-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
S_Quechua-2B + S_Yadava-2A | Discordant | SGDP | 136,597,712 – 136,597,824 |
112.0 |
0.00001794 |
3 | 1.0144 | 59,150.8 |
Data shown in this table can be downloaded from this page.
α | Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
β | Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
Mean TMRCA | Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default. |
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