HumanGenomeDating
Atlas of Variant Age
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Examples: LCT, MCM6, EDAR, ZEB1
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TGP
1000 Genomes Project
Populations: 26
Individuals: 2,535
Ancestry analyses:565,507,800
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SGDP
Simons Genome Diversity Project
Populations: 130
Individuals: 278
Ancestry analyses:6,800,992
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Genealogical Estimation of Variant Age (GEVA)

Inference of the ancestral origin of a genetic variant at a single locus

Unmatched Variant ID, using internal ID instead:
X436541589
Alleles:
reference
C
–
alternate
T
–
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
Chromosome 2   position  136,541,589  (GRCh37)
Allele frequency in   SGDP ⇪
Sample 97.5%
2.5%
AFR 87.5%
12.5%
AMR 100.0%
0.0%
CAS 100.0%
0.0%
EAS 100.0%
0.0%
OCN 96.0%
4.0%
SAS 98.7%
1.3%
WEA 100.0%
0.0%
reference ← allele frequency → alternate
Select clock model
  Mutation clock
  Recombination clock
  Joint clock
Age estimation summary Mutation clock
Data source Estimated age of T allele # pairs = concordant + discordant Quality score
    Genomes in SGDP12,480.4 generations 166  =  68  +  980.622
Pairwise results table Mutation clock
Haplotype pair Pair type Data source Breakpoint positions Physical length (bp) Genetic Length (cM) α β Mean TMRCA (generations)
S_Khomani_San-2B + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Khomani_San-2A + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Khomani_San-2A + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-1A + S_Khomani_San-2A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 13 37.8604 6,867.3
S_Mandenka-2A + S_Igorot-2B Concordant SGDP 136,536,015 – 136,542,940 6,924.5 0.00068202 1 4.3238 4,625.6
S_Ju_hoan_North-2B + S_Khomani_San-2B Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 10 37.8604 5,282.6
S_Ju_hoan_North-1A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Ju_hoan_North-3A + S_Igorot-2B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Irula-2A + B_Ju_hoan_North-4B Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Ju_hoan_North-3A + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Irula-2A + B_Ju_hoan_North-4A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Igorot-2B + B_Ju_hoan_North-4B Concordant SGDP 136,493,766 – 136,587,680 93,914.5 0.01488863 11 46.0790 4,774.4
S_Igorot-2B + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Khomani_San-1A + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3A + S_Ju_hoan_North-1A Concordant SGDP 136,399,121 – 136,644,413 245,292.0 0.04213799 16 118.7402 2,695.0
S_Ju_hoan_North-2B + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3A + B_Ju_hoan_North-4A Concordant SGDP 135,439,018 – 136,644,413 1,205,395.0 0.34527206 102 579.5896 3,519.7
S_Ju_hoan_North-1A + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3A + B_Ju_hoan_North-4B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-1A + B_Ju_hoan_North-4B Concordant SGDP 136,538,275 – 136,976,448 438,172.5 0.26702959 68 211.3228 6,435.7
S_Ju_hoan_North-3A + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
B_Ju_hoan_North-4A + B_Ju_hoan_North-4B Concordant SGDP 136,538,275 – 136,976,448 438,172.5 0.26702959 56 211.3228 5,299.9
S_Ju_hoan_North-3A + S_Khomani_San-2A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 12 37.8604 6,339.1
S_Mandenka-2A + B_Ju_hoan_North-4A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3A + S_Khomani_San-2B Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 10 37.8604 5,282.6
S_Khomani_San-2A + B_Ju_hoan_North-4A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 11 37.8604 5,810.8
S_Ju_hoan_North-3A + S_Khomani_San-1A Concordant SGDP 136,080,221 – 136,644,413 564,192.5 0.06056790 115 271.8124 8,461.7
S_Khomani_San-2B + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3B + S_Igorot-2A Concordant SGDP 136,493,766 – 136,587,680 93,914.5 0.01488863 9 46.0790 3,906.3
S_Khomani_San-2B + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3B + S_Ju_hoan_North-2A Concordant SGDP 136,411,978 – 137,134,850 722,872.5 0.65142718 21 347.9788 1,207.0
S_Khomani_San-1A + B_Ju_hoan_North-4A Concordant SGDP 136,080,221 – 136,785,841 705,620.0 0.08340953 137 339.6976 8,066.0
S_Ju_hoan_North-3B + S_Ju_hoan_North-2B Concordant SGDP 135,141,319 – 136,553,869 1,412,550.0 0.79564787 110 679.0240 3,239.9
S_Ju_hoan_North-2B + S_Khomani_San-2A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 12 37.8604 6,339.1
S_Ju_hoan_North-3B + B_Ju_hoan_North-4A Concordant SGDP 136,538,275 – 136,553,869 15,594.0 0.00175378 2 8.4851 4,714.1
S_Ju_hoan_North-2B + S_Khomani_San-1A Concordant SGDP 136,411,978 – 136,801,475 389,497.5 0.12086568 33 187.9588 3,511.4
S_Ju_hoan_North-3B + B_Ju_hoan_North-4B Concordant SGDP 135,621,863 – 136,590,087 968,224.5 0.22228238 85 465.7478 3,650.0
S_Ju_hoan_North-1A + S_Igorot-2B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-3B + S_Khomani_San-2A Concordant SGDP 136,538,275 – 136,762,052 223,776.5 0.02861613 32 108.4127 5,903.4
S_Ju_hoan_North-1A + B_Ju_hoan_North-4A Concordant SGDP 136,401,078 – 137,093,720 692,641.5 0.63258900 49 333.4679 2,938.8
S_Ju_hoan_North-2A + S_Igorot-2B Concordant SGDP 136,493,766 – 136,587,680 93,914.5 0.01488863 8 46.0790 3,472.3
S_Ju_hoan_North-1A + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-2A + S_Ju_hoan_North-1A Concordant SGDP 136,538,275 – 136,542,259 3,983.5 0.00039673 1 2.9121 6,867.9
S_Ju_hoan_North-1A + S_Khomani_San-1A Concordant SGDP 135,729,071 – 136,801,475 1,072,404.5 0.29129866 178 515.7542 6,902.5
S_Ju_hoan_North-2A + B_Ju_hoan_North-4A Concordant SGDP 135,536,371 – 136,542,259 1,005,888.0 0.29955011 135 483.8262 5,580.5
S_Mandenka-2A + S_Igorot-2A Concordant SGDP 136,536,015 – 136,542,940 6,924.5 0.00068202 1 4.3238 4,625.6
S_Ju_hoan_North-2A + B_Ju_hoan_North-4B Concordant SGDP 136,346,394 – 136,590,087 243,693.5 0.04498495 23 117.9729 3,899.2
S_Mandenka-2A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Ju_hoan_North-2A + S_Mandenka-2A Concordant SGDP 136,536,015 – 136,542,259 6,243.5 0.00060868 1 3.9969 5,003.9
S_Mandenka-2A + B_Ju_hoan_North-4B Concordant SGDP 136,536,015 – 136,542,940 6,924.5 0.00068202 1 4.3238 4,625.6
S_Ju_hoan_North-2A + S_Khomani_San-2B Concordant SGDP 136,538,275 – 136,778,638 240,362.5 0.03642946 20 116.3740 3,437.2
S_Khomani_San-2A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Ju_hoan_North-2A + S_Khomani_San-1A Concordant SGDP 136,538,275 – 136,542,259 3,983.5 0.00039673 1 2.9121 6,867.9
S_Khomani_San-2A + B_Ju_hoan_North-4B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-2B + S_Igorot-2A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Khomani_San-2A + S_Khomani_San-2B Concordant SGDP 135,755,745 – 136,781,557 1,025,812.0 0.16248506 19 493.3898 770.2
S_Ju_hoan_North-2B + S_Igorot-2B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Khomani_San-2B + S_Igorot-2B Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Ju_hoan_North-2B + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Khomani_San-2B + B_Ju_hoan_North-4A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 9 37.8604 4,754.3
S_Ju_hoan_North-2B + S_Ju_hoan_North-1A Concordant SGDP 136,406,898 – 137,034,384 627,485.5 0.40473764 30 302.1930 1,985.5
S_Khomani_San-2B + S_Khomani_San-1A Concordant SGDP 136,482,918 – 136,559,711 76,792.5 0.01436618 10 37.8604 5,282.6
S_Ju_hoan_North-2B + B_Ju_hoan_North-4B Concordant SGDP 135,621,863 – 136,976,448 1,354,585.0 0.47872416 174 651.2008 5,344.0
S_Khomani_San-1A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Khomani_San-1A + S_Mandenka-2A Concordant SGDP 136,538,275 – 136,566,474 28,199.0 0.00714054 8 14.5355 11,007.5
S_Igorot-2A + S_Irula-2A Concordant SGDP 136,540,857 – 136,542,259 1,401.5 0.00014258 1 1.6727 11,956.6
S_Igorot-2A + B_Ju_hoan_North-4A Concordant SGDP 136,538,275 – 136,542,940 4,664.5 0.00047007 1 3.2390 6,174.8
S_Irula-2A + S_Abkhasian-2B Discordant SGDP 135,760,098 – 136,642,220 882,122.5 0.07987209 19 424.4188 895.3
S_Irula-2A + S_Sindhi-1B Discordant SGDP 135,760,098 – 136,642,220 882,122.5 0.07987209 27 424.4188 1,272.3
S_Irula-2A + B_Australian-4B Discordant SGDP 135,760,098 – 136,642,220 882,122.5 0.07987209 24 424.4188 1,131.0
S_Igorot-2B + S_Chane-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Punjabi-1B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 68 397.9398 3,417.6
S_Igorot-2B + S_Relli-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Papuan-13A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2B + S_Spanish-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2B + S_Jordanian-3B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2B + S_Even-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Tajik-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Basque-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Estonian-2A Discordant SGDP 136,476,284 – 136,677,400 201,116.0 0.03439504 18 97.5357 3,691.0
S_Ju_hoan_North-3B + S_Bulgarian-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Burusho-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2B + B_Papuan-15A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Chukchi-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-1A + S_Chukchi-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Madiga-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-1A + S_BantuKenya-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Palestinian-1A Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 39 397.9398 1,960.1
S_Ju_hoan_North-1A + S_Saami-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Tu-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
B_Ju_hoan_North-4A + S_Orcadian-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Papuan-9A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
B_Ju_hoan_North-4B + S_Iranian-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Hungarian-1B Discordant SGDP 135,760,098 – 136,785,841 1,025,743.0 0.10319507 17 493.3566 689.2
S_Mandenka-2A + S_Dai-1A Discordant SGDP 135,760,098 – 136,541,590 781,492.5 0.06022918 74 376.1164 3,935.0
S_Irula-2A + B_Crete-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Khomani_San-2B + S_Mixe-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Eskimo_Sireniki-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_French-1B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 34 397.9398 1,708.8
S_Igorot-2B + S_Papuan-11A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + B_Crete-1B Discordant SGDP 135,760,098 – 136,541,590 781,492.5 0.06022918 82 376.1164 4,360.4
S_Igorot-2B + S_Papuan-4B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 29 397.9398 1,457.5
S_Igorot-2A + B_Yoruba-3B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Bengali-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 41 397.9398 2,060.6
S_Igorot-2A + S_Mayan-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 40 397.9398 2,010.4
S_Igorot-2B + S_Mala-3A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Zapotec-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Madiga-2A Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 31 397.9398 1,558.0
S_Igorot-2B + S_Mixtec-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Saami-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 63 397.9398 3,166.3
S_Igorot-2B + S_Ulchi-2A Discordant SGDP 136,389,749 – 136,587,056 197,307.0 0.03494792 13 95.7074 2,716.6
S_Igorot-2B + S_Yemenite_Jew-2B Discordant SGDP 136,389,749 – 136,587,056 197,307.0 0.03494792 10 95.7074 2,089.7
S_Igorot-2B + S_Aleut-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Mayan-2A Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 39 397.9398 1,960.1
S_Igorot-2B + S_Cambodian-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Japanese-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Naxi-2B Discordant SGDP 135,760,098 – 136,822,338 1,062,240.5 0.17379654 44 510.8754 1,722.5
S_Irula-2A + S_Papuan-10B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Han-2B Discordant SGDP 135,597,516 – 136,587,056 989,540.0 0.22804634 37 475.9792 1,554.7
S_Irula-2A + S_Balochi-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Oroqen-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Greek-1B Discordant SGDP 135,760,098 – 136,642,220 882,122.5 0.07987209 47 424.4188 2,214.8
S_Igorot-2B + S_She-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Iraqi_Jew-1B Discordant SGDP 135,760,098 – 136,642,220 882,122.5 0.07987209 51 424.4188 2,403.3
S_Igorot-2B + S_Japanese-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Irula-2A + S_Lezgin-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Ami-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-3A + S_Punjabi-3A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Papuan-8B Discordant SGDP 135,760,098 – 136,584,995 824,897.5 0.06864477 65 396.9508 3,275.0
S_Ju_hoan_North-2A + S_Ulchi-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2B + S_Papuan-10A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Eskimo_Sireniki-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Irula-1A Discordant SGDP 136,476,284 – 136,762,052 285,767.5 0.03668983 32 138.1684 4,632.0
S_Ju_hoan_North-2A + S_Pathan-1B Discordant SGDP 136,476,284 – 136,762,052 285,767.5 0.03668983 25 138.1684 3,618.8
S_Igorot-2A + S_BantuHerero-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2A + S_Albanian-1A Discordant SGDP 136,476,284 – 136,762,052 285,767.5 0.03668983 27 138.1684 3,908.3
S_Igorot-2A + S_Mixtec-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 90 397.9398 4,523.3
S_Ju_hoan_North-2A + S_Saami-1A Discordant SGDP 136,476,284 – 136,677,400 201,116.0 0.03439504 19 97.5357 3,896.0
S_Igorot-2A + S_Han-1A Discordant SGDP 136,070,592 – 136,587,056 516,463.5 0.05189090 32 248.9025 2,571.3
S_Ju_hoan_North-2A + S_Kyrgyz-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Hezhen-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 61 397.9398 3,065.8
S_Ju_hoan_North-2B + S_Eskimo_Chaplin-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Bougainville-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-2B + S_Uygur-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Papuan-8A Discordant SGDP 135,760,098 – 136,584,995 824,897.5 0.06864477 67 396.9508 3,375.7
S_Ju_hoan_North-2B + S_Orcadian-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Papuan-14B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 36 397.9398 1,809.3
S_Ju_hoan_North-2B + B_Crete-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Papuan-9B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-1A + S_Tlingit-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Igorot-1A Discordant SGDP 135,340,792 – 137,900,611 2,559,818.5 1.57335745 50 1,229.7129 813.2
S_Ju_hoan_North-1A + S_Punjabi-4A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Kapu-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Ju_hoan_North-1A + S_Finnish-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Irula-2B Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 32 397.9398 1,608.3
B_Ju_hoan_North-4A + S_Tuscan-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Mala-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
B_Ju_hoan_North-4B + S_Estonian-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Brahmin-1A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
B_Ju_hoan_North-4B + S_Saharawi-2B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Kusunda-1A Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 29 397.9398 1,457.5
S_Khomani_San-2A + S_Itelman-1B Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Makrani-2B Discordant SGDP 136,114,914 – 136,587,056 472,141.5 0.04834142 24 227.6279 2,108.7
S_Khomani_San-2B + S_Eskimo_Naukan-2A Discordant SGDP 136,541,513 – 136,541,590 77.0 0.00000783 2 1.0370 38,574.3
S_Igorot-2A + S_Punjabi-2A Discordant SGDP 135,760,098 – 136,587,056 826,958.0 0.06950493 34 397.9398 1,708.8
View as figure
Data shown in this table can be downloaded from this page.
α Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default).
β Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default).
Mean TMRCA Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default.
 

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