Genealogical Estimation of Variant Age (GEVA)
Inference of the ancestral origin of a genetic variant at a single locus
Unmatched Variant ID, using internal ID instead:
X436545450
Alleles:
reference
C–
alternate
A–
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
Chromosome
2
position 136,545,450 (GRCh37)
Allele frequency in SGDP ⇪
| Sample | 96.6% |
3.4% |
|
AFR |
95.5% |
4.5% |
|
AMR |
100.0% |
0.0% |
|
CAS |
100.0% |
0.0% |
|
EAS |
100.0% |
0.0% |
|
OCN |
96.0% |
4.0% |
|
SAS |
97.4% |
2.6% |
|
WEA |
92.7% |
7.3% |
|
| reference | ← allele frequency → | alternate |
Select clock model
Age estimation summary
| Data source | Estimated age of A allele |
# pairs = concordant + discordant | Quality score |
|---|---|---|---|
| Genomes in SGDP | 2,273.0 generations | 181 = 83 + 98 | 0.633 |
Pairwise results table
| Haplotype pair | Pair type | Data source | Breakpoint positions | Physical length (bp) | Genetic Length (cM) | α | β | Mean TMRCA (generations) |
|---|---|---|---|---|---|---|---|---|
| S_Masai-1A + S_Greek-1A | Concordant | SGDP | 135,757,046 – 136,642,220 |
885,174.5 |
0.12082585 |
29 | 425.8838 | 1,361.9 |
| S_Masai-1A + S_Iraqi_Jew-1B | Concordant | SGDP | 135,757,046 – 136,774,712 |
1,017,666.0 |
0.13438351 |
42 | 489.4797 | 1,716.1 |
| S_Greek-1A + S_Jordanian-1A | Concordant | SGDP | 135,757,046 – 136,642,220 |
885,174.5 |
0.12082585 |
33 | 425.8838 | 1,549.7 |
| S_Greek-1B + S_Iraqi_Jew-1B | Concordant | SGDP | 135,757,046 – 136,774,712 |
1,017,666.0 |
0.13438351 |
51 | 489.4797 | 2,083.8 |
| S_Mandenka-1B + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,781,557 |
1,021,459.5 |
0.09819052 |
57 | 491.3006 | 2,320.4 |
| S_Finnish-2B + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,976,448 |
1,216,350.0 |
0.32693006 |
66 | 584.8480 | 2,257.0 |
| S_Bougainville-1A + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
12 | 179.8360 | 1,334.5 |
| S_Palestinian-3B + S_Jordanian-1A | Concordant | SGDP | 135,760,098 – 136,787,770 |
1,027,672.0 |
0.12363655 |
48 | 494.2826 | 1,942.2 |
| B_Australian-3A + S_Abkhasian-2B | Concordant | SGDP | 135,758,721 – 136,787,770 |
1,029,049.0 |
0.13456484 |
35 | 494.9435 | 1,414.3 |
| B_Australian-3A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
19 | 129.7773 | 2,928.1 |
| B_Australian-3A + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,787,770 |
1,027,672.0 |
0.12363655 |
44 | 494.2826 | 1,780.4 |
| B_Australian-3A + S_Iraqi_Jew-1A | Concordant | SGDP | 135,636,692 – 136,774,712 |
1,138,019.5 |
0.24387981 |
47 | 547.2494 | 1,717.7 |
| B_Australian-3A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,758,721 – 136,778,638 |
1,019,917.0 |
0.10725822 |
53 | 490.5602 | 2,160.8 |
| S_Iraqi_Jew-2B + S_Russian-2A | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
31 | 511.8237 | 1,211.4 |
| S_Bougainville-1A + S_Finnish-2B | Concordant | SGDP | 135,597,516 – 136,785,841 |
1,188,325.0 |
0.26173649 |
40 | 571.3960 | 1,400.1 |
| S_Iraqi_Jew-1B + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
45 | 481.9379 | 1,867.5 |
| S_Bougainville-1A + S_Greek-1B | Concordant | SGDP | 135,758,721 – 136,785,841 |
1,027,120.0 |
0.11412336 |
35 | 494.0176 | 1,417.0 |
| S_Mandenka-1B + S_Bougainville-1A | Concordant | SGDP | 135,597,516 – 136,784,130 |
1,186,614.0 |
0.25879475 |
40 | 570.5747 | 1,402.1 |
| S_Bougainville-1A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,758,721 – 136,778,638 |
1,019,917.0 |
0.10725822 |
41 | 490.5602 | 1,671.6 |
| S_Finnish-2B + S_Greek-1A | Concordant | SGDP | 135,597,516 – 136,642,220 |
1,044,704.5 |
0.23841351 |
45 | 502.4582 | 1,791.2 |
| S_Bougainville-1A + S_Jordanian-1A | Concordant | SGDP | 135,518,997 – 136,787,770 |
1,268,773.0 |
0.37230122 |
41 | 610.0110 | 1,344.2 |
| S_Finnish-2B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,976,448 |
482,682.0 |
0.27212041 |
7 | 232.6874 | 601.7 |
| S_Bougainville-1A + S_Abkhasian-2B | Concordant | SGDP | 135,597,516 – 136,787,770 |
1,190,254.0 |
0.28217797 |
27 | 572.3219 | 943.5 |
| S_Greek-1A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,642,220 |
148,454.5 |
0.02506244 |
6 | 72.2582 | 1,660.7 |
| S_Yadava-1A + S_Greek-1B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
17 | 179.8360 | 1,890.6 |
| S_Greek-1B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
14 | 129.7773 | 2,157.5 |
| S_Yadava-1A + S_Iraqi_Jew-2B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
22 | 179.8360 | 2,446.7 |
| S_Masai-1A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,757,046 – 136,822,937 |
1,065,891.0 |
0.21895644 |
55 | 512.6277 | 2,145.8 |
| S_Yadava-1A + S_Palestinian-3B | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
18 | 179.8360 | 2,001.8 |
| S_Masai-1A + S_Abkhasian-2B | Concordant | SGDP | 135,597,516 – 136,822,937 |
1,225,421.0 |
0.33654409 |
36 | 589.2021 | 1,222.0 |
| S_Yadava-1A + S_Chechen-1A | Concordant | SGDP | 135,597,516 – 136,762,052 |
1,164,536.0 |
0.24705801 |
76 | 559.9773 | 2,714.4 |
| S_Iraqi_Jew-2B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 137,104,182 |
610,416.0 |
0.62289889 |
14 | 293.9997 | 952.4 |
| S_Yadava-1B + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
15 | 179.8360 | 1,668.2 |
| S_Iraqi_Jew-1B + S_Abkhasian-2B | Concordant | SGDP | 135,758,721 – 136,774,712 |
1,015,991.0 |
0.10435804 |
39 | 488.6757 | 1,596.2 |
| S_Yadava-1B + S_Finnish-2B | Concordant | SGDP | 135,954,725 – 136,762,052 |
807,326.5 |
0.07313183 |
41 | 388.5167 | 2,110.6 |
| S_Palestinian-3B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 137,040,522 |
546,756.0 |
0.40351417 |
27 | 263.4429 | 2,049.8 |
| S_Yadava-1B + S_Greek-1A | Concordant | SGDP | 136,003,427 – 136,642,220 |
638,793.5 |
0.06314119 |
19 | 307.6209 | 1,235.3 |
| S_Mandenka-1B + S_Greek-1A | Concordant | SGDP | 135,757,046 – 136,642,220 |
885,174.5 |
0.12082585 |
37 | 425.8838 | 1,737.6 |
| S_Yadava-1B + S_Iraqi_Jew-1A | Concordant | SGDP | 135,978,431 – 136,762,052 |
783,620.5 |
0.07237876 |
30 | 377.1378 | 1,590.9 |
| S_Mandenka-1B + S_Abkhasian-2B | Concordant | SGDP | 135,597,516 – 136,784,130 |
1,186,614.0 |
0.25879475 |
54 | 570.5747 | 1,892.8 |
| S_Yadava-1B + S_Iraqi_Jew-1B | Concordant | SGDP | 135,978,431 – 136,762,052 |
783,620.5 |
0.07237876 |
29 | 377.1378 | 1,537.9 |
| S_Finnish-2B + S_Iraqi_Jew-1A | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
50 | 511.8237 | 1,953.8 |
| S_Yadava-1B + S_Jordanian-1A | Concordant | SGDP | 135,978,431 – 136,762,052 |
783,620.5 |
0.07237876 |
26 | 377.1378 | 1,378.8 |
| S_Finnish-2B + S_Abkhasian-2B | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
48 | 511.8237 | 1,875.6 |
| S_Yadava-1B + S_Russian-2A | Concordant | SGDP | 136,023,831 – 136,762,052 |
738,221.0 |
0.07141606 |
37 | 355.3461 | 2,082.5 |
| S_Greek-1A + S_Palestinian-3B | Concordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
32 | 424.4188 | 1,507.9 |
| S_Yadava-1B + S_Abkhasian-2B | Concordant | SGDP | 136,003,427 – 136,762,052 |
758,625.0 |
0.07178569 |
26 | 365.1400 | 1,424.1 |
| S_Greek-1A + S_Abkhasian-2B | Concordant | SGDP | 135,437,456 – 136,642,220 |
1,204,764.0 |
0.34748434 |
21 | 579.2867 | 725.0 |
| S_Luo-2A + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
11 | 179.8360 | 1,223.3 |
| S_Greek-1B + S_Iraqi_Jew-2B | Concordant | SGDP | 135,597,516 – 136,822,937 |
1,225,421.0 |
0.33654409 |
70 | 589.2021 | 2,376.1 |
| S_Luo-2A + S_Yadava-1B | Concordant | SGDP | 135,993,765 – 136,762,052 |
768,286.5 |
0.07200356 |
26 | 369.7775 | 1,406.3 |
| S_Greek-1B + S_Russian-2A | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
65 | 511.8237 | 2,539.9 |
| S_Luo-2A + S_Finnish-2B | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
52 | 511.8237 | 2,031.9 |
| S_Masai-1A + S_Finnish-2B | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
50 | 511.8237 | 1,953.8 |
| S_Luo-2A + S_Masai-1A | Concordant | SGDP | 135,993,765 – 136,822,937 |
829,171.5 |
0.16148964 |
26 | 399.0023 | 1,303.3 |
| S_Masai-1A + S_Greek-1B | Concordant | SGDP | 135,757,046 – 137,406,136 |
1,649,090.0 |
0.97976228 |
27 | 792.5632 | 681.3 |
| S_Luo-2A + S_Iraqi_Jew-2B | Concordant | SGDP | 135,536,371 – 136,822,937 |
1,286,566.0 |
0.41725560 |
78 | 618.5517 | 2,522.0 |
| S_Masai-1A + S_Iraqi_Jew-1A | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
41 | 511.8237 | 1,602.1 |
| S_Luo-2A + S_Iraqi_Jew-1B | Concordant | SGDP | 135,677,724 – 136,762,052 |
1,084,327.5 |
0.23803548 |
50 | 521.4772 | 1,917.6 |
| S_Masai-1A + S_Jordanian-1A | Concordant | SGDP | 135,487,023 – 136,787,770 |
1,300,746.5 |
0.37564434 |
14 | 625.3583 | 447.7 |
| S_Luo-2A + S_Russian-2A | Concordant | SGDP | 136,389,477 – 136,822,937 |
433,460.0 |
0.14511886 |
23 | 209.0608 | 2,200.3 |
| S_Iraqi_Jew-2B + S_Iraqi_Jew-1A | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
55 | 511.8237 | 2,149.2 |
| S_Luo-2A + S_Abkhasian-2B | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
39 | 511.8237 | 1,524.0 |
| S_Iraqi_Jew-2B + S_Abkhasian-2B | Concordant | SGDP | 135,758,721 – 136,822,937 |
1,064,216.0 |
0.18893097 |
53 | 511.8237 | 2,071.0 |
| S_Luo-2A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
12 | 129.7773 | 1,849.3 |
| S_Iraqi_Jew-1A + S_Russian-2A | Concordant | SGDP | 135,758,721 – 136,850,711 |
1,091,990.0 |
0.27707870 |
58 | 525.1552 | 2,208.9 |
| S_Luo-2B + B_Australian-3A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
23 | 179.8360 | 2,557.9 |
| S_Iraqi_Jew-1B + S_Jordanian-1A | Concordant | SGDP | 135,757,046 – 137,040,522 |
1,283,476.0 |
0.49927759 |
48 | 617.0685 | 1,555.7 |
| S_Luo-2B + S_Bougainville-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
19 | 179.8360 | 2,113.0 |
| S_Iraqi_Jew-1B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 137,040,522 |
546,756.0 |
0.40351417 |
17 | 263.4429 | 1,290.6 |
| S_Luo-2B + S_Finnish-2B | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
24 | 171.2704 | 2,802.6 |
| S_Palestinian-3B + S_Russian-2A | Concordant | SGDP | 135,760,098 – 136,822,937 |
1,062,839.0 |
0.17800268 |
65 | 511.1627 | 2,543.2 |
| S_Luo-2B + S_Greek-1A | Concordant | SGDP | 136,389,477 – 136,642,220 |
252,743.5 |
0.04698827 |
9 | 122.3169 | 1,471.6 |
| S_Jordanian-1A + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
12 | 129.7773 | 1,849.3 |
| S_Luo-2B + S_Iraqi_Jew-2B | Concordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
25 | 171.2704 | 2,919.4 |
| S_Mandenka-1B + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
25 | 179.8360 | 2,780.3 |
| S_Luo-2B + S_Palestinian-3B | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
13 | 129.7773 | 2,003.4 |
| S_Mandenka-1B + S_Iraqi_Jew-1A | Concordant | SGDP | 135,758,721 – 136,774,712 |
1,015,991.0 |
0.10435804 |
54 | 488.6757 | 2,210.1 |
| S_Luo-2B + S_Chechen-1A | Concordant | SGDP | 136,488,251 – 136,762,052 |
273,801.0 |
0.03505228 |
15 | 132.4245 | 2,265.4 |
| S_Mandenka-1B + S_Russian-2A | Concordant | SGDP | 135,433,445 – 136,778,638 |
1,345,193.0 |
0.37054921 |
77 | 646.6926 | 2,381.3 |
| S_Mandenka-1B + S_Chechen-1A | Concordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
23 | 129.7773 | 3,544.5 |
| B_Australian-3A + S_Yadava-1A | Concordant | SGDP | 136,389,477 – 136,762,052 |
372,575.0 |
0.05563277 |
18 | 179.8360 | 2,001.8 |
| B_Australian-3A + S_Greek-1A | Concordant | SGDP | 135,758,721 – 136,642,220 |
883,499.5 |
0.09080038 |
23 | 425.0798 | 1,082.1 |
| S_Iraqi_Jew-1A + S_Kyrgyz-1A | Discordant | SGDP | 136,494,791 – 136,785,841 |
291,049.5 |
0.04814010 |
18 | 140.7038 | 2,558.6 |
| S_Iraqi_Jew-1A + S_Ami-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-2B + S_Tajik-1A | Discordant | SGDP | 135,760,098 – 136,781,557 |
1,021,459.5 |
0.09819052 |
31 | 491.3006 | 1,262.0 |
| S_Masai-1A + S_Russian-2B | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
40 | 488.0147 | 1,639.3 |
| S_Masai-1A + S_Papuan-11A | Discordant | SGDP | 135,343,836 – 136,976,283 |
1,632,447.0 |
0.60553821 |
79 | 784.5746 | 2,013.8 |
| S_Jordanian-1A + S_Mozabite-1A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
54 | 488.0147 | 2,213.0 |
| S_Iraqi_Jew-1B + S_Masai-1B | Discordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
26 | 171.2704 | 3,036.1 |
| S_Chechen-1A + S_Icelandic-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Chechen-1A + S_Hazara-2A | Discordant | SGDP | 135,597,516 – 136,545,458 |
947,942.0 |
0.21923693 |
154 | 456.0122 | 6,754.2 |
| S_Abkhasian-2B + S_Tuscan-2A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
34 | 488.0147 | 1,393.4 |
| S_Abkhasian-2B + S_Papuan-9B | Discordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
29 | 428.1460 | 1,354.7 |
| S_Russian-2A + S_Turkish-1B | Discordant | SGDP | 135,760,098 – 137,032,995 |
1,272,897.0 |
0.43209531 |
88 | 611.9906 | 2,875.9 |
| S_Russian-2A + S_Masai-2B | Discordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
36 | 171.2704 | 4,203.9 |
| S_Iraqi_Jew-1B + S_Papuan-6B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
61 | 481.9379 | 2,531.4 |
| S_Iraqi_Jew-1B + S_Luhya-2A | Discordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
35 | 171.2704 | 4,087.1 |
| S_Yadava-1A + S_Japanese-2A | Discordant | SGDP | 136,389,749 – 136,555,141 |
165,392.5 |
0.02794068 |
9 | 80.3884 | 2,239.1 |
| S_Palestinian-3B + S_Iraqi_Jew-2A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
43 | 481.9379 | 1,784.5 |
| S_Yadava-1A + S_Korean-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Jordanian-1A + S_Iranian-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Yadava-1A + S_Thai-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Masai-1A + S_Palestinian-3A | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
38 | 493.3566 | 1,540.5 |
| S_Yadava-1A + S_Hawaiian-1A | Discordant | SGDP | 136,389,749 – 136,649,985 |
260,236.5 |
0.04769985 |
14 | 125.9135 | 2,223.7 |
| S_Iraqi_Jew-2B + S_Armenian-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Yadava-1A + S_Balochi-1B | Discordant | SGDP | 136,389,749 – 136,649,985 |
260,236.5 |
0.04769985 |
17 | 125.9135 | 2,700.3 |
| S_Iraqi_Jew-1A + S_Lahu-1A | Discordant | SGDP | 135,978,431 – 136,762,052 |
783,620.5 |
0.07237876 |
49 | 377.1378 | 2,598.5 |
| S_Yadava-1A + S_Georgian-2B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
140 | 481.9379 | 5,809.9 |
| S_Iraqi_Jew-1A + S_Hawaiian-1A | Discordant | SGDP | 135,760,098 – 136,649,985 |
889,887.5 |
0.08225686 |
33 | 428.1460 | 1,541.5 |
| S_Yadava-1B + S_Mixe-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Naxi-1B | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
50 | 493.3566 | 2,026.9 |
| S_Yadava-1B + S_Yakut-2A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Khonda_Dora-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Yadava-1B + S_Korean-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Masai-2A | Discordant | SGDP | 136,407,322 – 136,762,052 |
354,730.0 |
0.05005543 |
28 | 171.2704 | 3,269.7 |
| S_Yadava-1B + S_Kinh-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Palestinian-3B + S_Bougainville-2B | Discordant | SGDP | 135,760,098 – 136,755,811 |
995,713.5 |
0.08759616 |
47 | 478.9425 | 1,962.7 |
| S_Yadava-1B + S_Igorot-1B | Discordant | SGDP | 135,954,725 – 136,649,985 |
695,260.0 |
0.06687210 |
20 | 334.7248 | 1,195.0 |
| S_Palestinian-3B + S_Russian-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Luo-2B + S_BantuHerero-1A | Discordant | SGDP | 136,385,824 – 136,781,557 |
395,733.0 |
0.07217276 |
22 | 190.9518 | 2,304.2 |
| S_Jordanian-1A + S_Brahmin-2A | Discordant | SGDP | 136,080,619 – 136,822,338 |
741,719.0 |
0.15379348 |
36 | 357.0251 | 2,016.7 |
| S_Luo-2B + S_Saharawi-1A | Discordant | SGDP | 135,930,669 – 136,762,052 |
831,383.0 |
0.07504234 |
133 | 400.0638 | 6,648.9 |
| S_Masai-1A + S_Papuan-10A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
39 | 488.0147 | 1,598.3 |
| S_Luo-2B + S_Georgian-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Masai-1A + S_Sindhi-1B | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
36 | 493.3566 | 1,459.4 |
| S_Luo-2B + S_Samaritan-1B | Discordant | SGDP | 136,493,766 – 136,762,052 |
268,286.0 |
0.03370694 |
21 | 129.7773 | 3,236.3 |
| S_Masai-1A + S_Jordanian-1B | Discordant | SGDP | 135,760,098 – 136,976,283 |
1,216,185.5 |
0.31932188 |
47 | 584.7690 | 1,607.5 |
| S_Luo-2B + S_Palestinian-2B | Discordant | SGDP | 135,930,669 – 136,762,052 |
831,383.0 |
0.07504234 |
132 | 400.0638 | 6,598.9 |
| S_Iraqi_Jew-2B + S_Altaian-1A | Discordant | SGDP | 135,760,098 – 136,781,557 |
1,021,459.5 |
0.09819052 |
33 | 491.3006 | 1,343.4 |
| S_Luo-2B + S_Abkhasian-2A | Discordant | SGDP | 135,930,669 – 136,642,220 |
711,551.5 |
0.06639784 |
125 | 342.5447 | 7,298.3 |
| S_Iraqi_Jew-2B + S_Sardinian-2A | Discordant | SGDP | 135,760,098 – 136,781,557 |
1,021,459.5 |
0.09819052 |
28 | 491.3006 | 1,139.8 |
| S_Finnish-2B + S_Altaian-1A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
29 | 488.0147 | 1,188.5 |
| S_Iraqi_Jew-1A + S_Quechua-2A | Discordant | SGDP | 135,340,792 – 136,545,458 |
1,204,665.5 |
0.35246129 |
90 | 579.2394 | 3,107.5 |
| S_Finnish-2B + S_Brahui-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1A + S_Burmese-1B | Discordant | SGDP | 136,080,619 – 136,785,841 |
705,221.5 |
0.08319201 |
31 | 339.5063 | 1,826.2 |
| S_Finnish-2B + S_Finnish-2A | Discordant | SGDP | 135,216,236 – 137,040,522 |
1,824,285.5 |
0.95063941 |
10 | 876.6570 | 228.1 |
| S_Iraqi_Jew-1A + S_Dusun-1B | Discordant | SGDP | 135,942,298 – 136,785,841 |
843,542.5 |
0.08827139 |
42 | 405.9004 | 2,069.5 |
| S_Finnish-2B + S_Basque-2A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
15 | 488.0147 | 614.7 |
| S_Iraqi_Jew-1A + S_Yadava-2B | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
69 | 493.3566 | 2,797.2 |
| S_Finnish-2B + S_Sardinian-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Tlingit-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Finnish-2B + S_Chechen-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
16 | 481.9379 | 664.0 |
| S_Iraqi_Jew-1B + S_She-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Finnish-2B + B_Crete-2B | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
65 | 488.0147 | 2,663.9 |
| S_Iraqi_Jew-1B + S_Papuan-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Greek-1A + S_Even-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Madiga-2B | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
46 | 493.3566 | 1,864.8 |
| S_Greek-1A + S_Druze-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Albanian-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
59 | 481.9379 | 2,448.4 |
| S_Greek-1B + S_Ulchi-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Druze-2A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
58 | 481.9379 | 2,406.9 |
| S_Greek-1B + S_Eskimo_Sireniki-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Iraqi_Jew-1B + S_Karitiana-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Greek-1B + S_Tu-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Palestinian-3B + S_Papuan-7B | Discordant | SGDP | 135,760,098 – 136,755,938 |
995,840.5 |
0.08760347 |
49 | 479.0034 | 2,045.9 |
| S_Greek-1B + S_Irula-2A | Discordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
47 | 424.4188 | 2,214.8 |
| S_Palestinian-3B + S_Palestinian-2B | Discordant | SGDP | 136,389,749 – 137,420,154 |
1,030,405.5 |
0.91246993 |
32 | 495.5946 | 1,291.4 |
| S_Greek-1B + S_Hungarian-1B | Discordant | SGDP | 135,760,098 – 136,642,220 |
882,122.5 |
0.07987209 |
44 | 424.4188 | 2,073.4 |
| S_Palestinian-3B + S_Lezgin-1B | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
44 | 481.9379 | 1,826.0 |
| S_Masai-1A + S_Bougainville-1B | Discordant | SGDP | 135,597,516 – 136,785,841 |
1,188,325.0 |
0.26173649 |
60 | 571.3960 | 2,100.1 |
| S_Jordanian-1A + S_Tlingit-2B | Discordant | SGDP | 135,760,098 – 136,822,338 |
1,062,240.5 |
0.17379654 |
55 | 510.8754 | 2,153.2 |
| S_Masai-1A + S_Papuan-1A | Discordant | SGDP | 135,343,836 – 136,976,283 |
1,632,447.0 |
0.60553821 |
69 | 784.5746 | 1,758.9 |
| S_Jordanian-1A + S_Makrani-1B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Jordanian-1A + S_French-1A | Discordant | SGDP | 135,487,468 – 136,774,712 |
1,287,244.0 |
0.34466795 |
70 | 618.8771 | 2,262.2 |
| S_Jordanian-1A + S_Greek-2A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
61 | 488.0147 | 2,499.9 |
| B_Australian-3A + S_Daur-2A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Jordanian-1A + S_Mandenka-1A | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
66 | 493.3566 | 2,675.5 |
| B_Australian-3A + S_Tujia-2A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
52 | 481.9379 | 2,158.0 |
| S_Russian-2A + S_Tuscan-1B | Discordant | SGDP | 135,340,792 – 136,762,052 |
1,421,259.5 |
0.38028236 |
40 | 683.2046 | 1,171.0 |
| B_Australian-3A + S_Hezhen-1A | Discordant | SGDP | 135,760,098 – 136,774,712 |
1,014,614.0 |
0.09342975 |
55 | 488.0147 | 2,254.0 |
| S_Abkhasian-2B + B_Australian-4A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| B_Australian-3A + S_Thai-1A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Abkhasian-2B + S_Mala-3A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
31 | 481.9379 | 1,286.5 |
| B_Australian-3A + S_Bengali-2B | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Chechen-1A + S_Relli-2B | Discordant | SGDP | 136,545,376 – 136,762,052 |
216,676.0 |
0.02783176 |
29 | 105.0045 | 5,523.6 |
| S_Bougainville-1A + B_Australian-3B | Discordant | SGDP | 135,597,516 – 136,822,937 |
1,225,421.0 |
0.33654409 |
45 | 589.2021 | 1,527.5 |
| S_Chechen-1A + S_Hazara-1A | Discordant | SGDP | 135,760,098 – 136,762,052 |
1,001,954.0 |
0.08851659 |
123 | 481.9379 | 5,104.4 |
| S_Bougainville-1A + S_Mansi-2A | Discordant | SGDP | 136,545,376 – 136,545,458 |
82.0 |
0.00001068 |
2 | 1.0394 | 38,485.2 |
| S_Chechen-1A + B_Crete-1A | Discordant | SGDP | 135,760,098 – 136,545,458 |
785,360.0 |
0.06069551 |
109 | 377.9728 | 5,767.6 |
| S_Bougainville-1A + S_Iranian-2A | Discordant | SGDP | 135,760,098 – 136,785,841 |
1,025,743.0 |
0.10319507 |
34 | 493.3566 | 1,378.3 |
Data shown in this table can be downloaded from this page.
| α | Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
| β | Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
| Mean TMRCA | Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default. |
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Patrick K. Albers