HumanGenomeDating
Atlas of Variant Age
Search
Examples: LCT, MCM6, EDAR, ZEB1
Shared Ancestry Database
TGP
1000 Genomes Project
Populations: 26
Individuals: 2,535
Ancestry analyses:565,507,800
Watch movie
SGDP
Simons Genome Diversity Project
Populations: 130
Individuals: 278
Ancestry analyses:6,800,992
Watch movie
Shared Ancestry Movies
About
Bulk downloads
Frequently Asked Questions
Citation
Download profile data
for this variant in csv format

Genealogical Estimation of Variant Age (GEVA)

Inference of the ancestral origin of a genetic variant at a single locus

rs985134850
Alleles:
reference
C
ancestral
alternate
T
derived
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
How was the ancestral/derived state determined?Chromosome 10   position  31,685,228  (GRCh37) Explore rs985134850 on Ensembl!
Allele frequency in   SGDP ⇪
Sample 99.6%
0.4%
AFR 100.0%
0.0%
AMR 100.0%
0.0%
CAS 98.1%
1.9%
EAS 98.9%
1.1%
OCN 100.0%
0.0%
SAS 100.0%
0.0%
WEA 100.0%
0.0%
reference ← allele frequency → alternate
Select clock model
  Mutation clock
  Recombination clock
  Joint clock
Age estimation summary Joint clock
Data source Estimated age of T allele # pairs = concordant + discordant Quality score
    Genomes in SGDP437.8 generations 98  =  1  +  971.000
Pairwise results table Joint clock
Haplotype pair Pair type Data source Breakpoint positions Physical length (bp) Genetic Length (cM) α β Mean TMRCA (generations)
S_Yakut-1A + S_Oroqen-2A Concordant SGDP 31,068,515 – 32,289,319 1,220,804.0 0.76766556 17 1,201.1184 283.1
S_Oroqen-2A + S_Uygur-1A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 14 96.4896 2,901.9
S_Oroqen-2A + S_Ulchi-2B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 10 96.4896 2,072.8
S_Oroqen-2A + S_Mixe-2B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 7 81.5009 1,717.8
S_Oroqen-2A + B_French-3B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Bergamo-2A Discordant SGDP 31,685,184 – 31,744,517 59,333.5 0.00194370 6 31.0350 3,866.6
S_Oroqen-2A + S_Kalash-2A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Papuan-4A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Cambodian-2B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 14 96.4896 2,901.9
S_Yakut-1A + S_Even-1A Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Yakut-1A + S_Yakut-2B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 12 96.4896 2,487.3
S_Yakut-1A + S_Even-2B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Yakut-1A + S_Even-3B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Ulchi-1B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 15 96.4896 3,109.1
S_Yakut-1A + S_Tubalar-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Tu-1B Discordant SGDP 31,134,695 – 31,868,351 733,656.0 0.25053506 75 553.5829 2,709.6
S_Oroqen-2A + B_Australian-3B Discordant SGDP 31,685,184 – 31,752,325 67,141.0 0.00228293 5 35.0540 2,852.7
S_Yakut-1A + S_Han-1A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Irula-1A Discordant SGDP 31,685,184 – 31,752,325 67,141.0 0.00228293 6 35.0540 3,423.3
S_Yakut-1A + S_Tu-2A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Finnish-1A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Uygur-2B Discordant SGDP 31,565,428 – 31,697,077 131,648.5 0.00509559 10 68.2678 2,929.6
S_Oroqen-2A + S_Polish-1B Discordant SGDP 31,565,428 – 31,697,077 131,648.5 0.00509559 7 68.2678 2,050.7
S_Yakut-1A + S_She-2A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Yemenite_Jew-1B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Yakut-1A + S_Burmese-1B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 12 96.4896 2,487.3
S_Oroqen-2A + S_Tubalar-2B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Kinh-2B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Naxi-3B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 7 81.5009 1,717.8
S_Yakut-1A + S_Kinh-1B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Dai-2A Discordant SGDP 31,094,427 – 31,868,351 773,924.5 0.30228266 82 614.3099 2,669.7
S_Yakut-1A + S_Bougainville-2B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Thai-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Papuan-3B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Maori-1B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Papuan-1B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Papuan-7B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Papuan-4A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Kusunda-2A Discordant SGDP 31,583,614 – 31,868,351 284,737.0 0.01207056 14 147.3302 1,900.5
S_Yakut-1A + S_Papuan-7B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Armenian-1A Discordant SGDP 31,565,428 – 31,697,077 131,648.5 0.00509559 6 68.2678 1,757.8
S_Yakut-1A + S_Papuan-9B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Icelandic-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Papuan-12B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Tuscan-2B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Papuan-2A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 13 96.4896 2,694.6
S_Oroqen-2A + B_Dai-4B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 12 96.4896 2,487.3
S_Yakut-1A + S_Mansi-2A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Mozabite-1A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Kapu-1B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Pima-2A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Mala-3B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Mongola-2B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Brahmin-1A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 13 96.4896 2,694.6
S_Oroqen-2A + S_Altaian-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Kusunda-1B Discordant SGDP 31,583,614 – 31,868,351 284,737.0 0.01207056 16 147.3302 2,172.0
S_Oroqen-2A + S_Even-2A Discordant SGDP 31,068,515 – 32,645,290 1,576,775.5 1.02001158 80 1,573.8615 1,016.6
S_Yakut-1A + S_Kusunda-2A Discordant SGDP 31,583,614 – 31,868,351 284,737.0 0.01207056 17 147.3302 2,307.7
S_Oroqen-2A + S_Miao-1B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 14 96.4896 2,901.9
S_Yakut-1A + S_Brahui-2A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Yi-2B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 9 96.4896 1,865.5
S_Yakut-1A + S_Makrani-1B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Oroqen-2A + S_She-1B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Balochi-1A Discordant SGDP 31,032,459 – 31,868,351 835,892.0 0.39159157 111 715.5014 3,102.7
S_Oroqen-2A + S_Korean-2A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 14 96.4896 2,901.9
S_Yakut-1A + S_Pathan-2A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 12 96.4896 2,487.3
S_Oroqen-2A + S_Thai-2A Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Yakut-1A + S_Burusho-1B Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 11 96.4896 2,280.0
S_Oroqen-2A + S_Dusun-1B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Kalash-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Papuan-5B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 5 81.5009 1,227.0
S_Yakut-1A + S_Sindhi-2A Discordant SGDP 31,565,428 – 31,697,077 131,648.5 0.00509559 7 68.2678 2,050.7
S_Oroqen-2A + S_Papuan-14A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Punjabi-4B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Chukchi-1B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Abkhasian-1B Discordant SGDP 31,685,184 – 31,841,841 156,657.5 0.00728276 11 82.0218 2,682.2
S_Oroqen-2A + S_Madiga-1B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Bulgarian-1A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Pathan-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Czech-2A Discordant SGDP 31,685,184 – 31,744,517 59,333.5 0.00194370 7 31.0350 4,511.0
S_Oroqen-2A + S_Albanian-1B Discordant SGDP 31,685,184 – 31,792,748 107,564.0 0.00336064 7 55.3192 2,530.8
S_Yakut-1A + S_Estonian-2B Discordant SGDP 31,685,184 – 31,792,748 107,564.0 0.00336064 9 55.3192 3,253.8
S_Oroqen-2A + S_English-2B Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Finnish-2B Discordant SGDP 31,685,184 – 31,744,517 59,333.5 0.00194370 7 31.0350 4,511.0
S_Oroqen-2A + S_Finnish-1B Discordant SGDP 31,685,184 – 31,841,841 156,657.5 0.00728276 9 82.0218 2,194.5
S_Yakut-1A + S_Saami-1A Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 7 81.5009 1,717.8
S_Oroqen-2A + S_Druze-1B Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_French-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + S_Sardinian-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Yakut-1A + S_Iranian-1A Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Oroqen-2A + S_Jordanian-2A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Yakut-1A + S_Palestinian-3A Discordant SGDP 31,685,184 – 31,685,235 51.0 0.00000692 4 1.0300 77,669.0
S_Oroqen-2A + S_Yemenite_Jew-1B Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 7 81.5009 1,717.8
S_Yakut-1A + S_Sardinian-1A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + B_French-3A Discordant SGDP 31,548,099 – 31,697,077 148,977.5 0.01123964 8 81.5009 1,963.2
S_Yakut-1A + S_Orcadian-2A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
S_Oroqen-2A + B_Papuan-15A Discordant SGDP 31,685,184 – 31,868,351 183,167.5 0.00946144 14 96.4896 2,901.9
S_Yakut-1A + S_Yemenite_Jew-2A Discordant SGDP 31,685,184 – 31,697,077 11,893.0 0.00088614 4 7.4176 10,785.2
View as figure
Data shown in this table can be downloaded from this page.
α Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default).
β Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default).
Mean TMRCA Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default.
 

The human.genome.dating database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of human.genome.dating are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

human.genome.dating © 2019 - 2026 Contact Terms & Conditions This website does not use cookies and does not collect any personal information about you.